Project Name | Stars | Downloads | Repos Using This | Packages Using This | Most Recent Commit | Total Releases | Latest Release | Open Issues | License | Language |
---|---|---|---|---|---|---|---|---|---|---|
Deepvariant | 2,978 | 5 months ago | 8 | bsd-3-clause | Python | |||||
DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data. | ||||||||||
Nucleus | 675 | 2 | 3 years ago | 18 | August 31, 2021 | 1 | other | C++ | ||
Python and C++ code for reading and writing genomics data. | ||||||||||
Janggu | 205 | 3 years ago | 19 | August 04, 2020 | gpl-3.0 | Jupyter Notebook | ||||
Deep learning infrastructure for genomics | ||||||||||
Bigbio | 54 | 7 years ago | 3 | Jupyter Notebook | ||||||
Genomic_benchmarks | 52 | 5 months ago | 8 | August 10, 2022 | 7 | apache-2.0 | Jupyter Notebook | |||
Benchmarks for classification of genomic sequences | ||||||||||
Dietnet | 15 | 7 years ago | 2 | Python | ||||||
Diet networks in TensorFlow | ||||||||||
Mantis Ml Release | 15 | 4 years ago | 12 | August 13, 2020 | mpl-2.0 | Python | ||||
mantis-ml: Stochastic semi-supervised learning to prioritise genes from high throughput genomic screens | ||||||||||
Jarvis | 9 | 2 years ago | 1 | mpl-2.0 | HTML | |||||
JARVIS: a comprehensive deep learning framework to prioritise non-coding variants in whole genomes | ||||||||||
Deepbio | 8 | 4 years ago | mit | |||||||
This is a curated list of tutorials, projects, libraries, videos, papers, books and anything related to applications of Deep Learning to biomedicine. Feel free to make a pull request to contribute to this list. | ||||||||||
Tensorflow_tutorial_genomics | 5 | 6 years ago | Jupyter Notebook | |||||||
A collection of TensorFlow tutorials to analyze genomics datasets |