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The Top 23 Dna Open Source Projects

Open source projects categorized as Dna
Categories > Science > Dna
Biopython ⭐ 3,918
Official git repository for Biopython (originally converted from CVS)
dependent packages 1,373total releases 58most recent commit 3 months agopypi biopython} Downloads
Deepvariant ⭐ 2,978
DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.
most recent commit 4 months ago
Gatk ⭐ 1,576
Official code repository for GATK versions 4 and up
dependent packages 2total releases 46most recent commit a month ago
Galaxy ⭐ 1,211
Data intensive science for everyone.
dependent packages 23total releases 30most recent commit 3 months agopypi galaxy-util} Downloads
Exceldna ⭐ 1,166
Excel-DNA - Free and easy .NET for Excel. This repository contains the core Excel-DNA library.
dependent packages 31total releases 61most recent commit 3 months agonuget ExcelDna.Integration} Downloads
Vg ⭐ 1,022
tools for working with genome variation graphs
most recent commit 3 months ago
Diamond ⭐ 900
Accelerated BLAST compatible local sequence aligner.
most recent commit 3 months ago
Khmer ⭐ 729
In-memory nucleotide sequence k-mer counting, filtering, graph traversal and more
dependent packages 7total releases 18most recent commit 2 years agopypi khmer} Downloads
Netprog_basics ⭐ 682
Code, Examples, and Resources for the Network Programmability Basics Video Course
most recent commit a year ago
Nucleus ⭐ 675
Python and C++ code for reading and writing genomics data.
dependent packages 2total releases 18most recent commit 3 years agopypi google-nucleus} Downloads
Poly ⭐ 620
A Go package for engineering organisms.
most recent commit 3 months ago
Chip Seq Analysis ⭐ 586
ChIP-seq analysis notes from Ming Tang
most recent commit 2 years ago
Dnafeaturesviewer ⭐ 500
👁️ Python library to plot DNA sequence features (e.g. from Genbank files)
dependent packages 22total releases 30most recent commit 6 months agopypi dna-features-viewer} Downloads
Pyfaidx ⭐ 427
Efficient pythonic random access to fasta subsequences
dependent packages 119total releases 86most recent commit 3 months agopypi pyfaidx} Downloads
Jellyfish ⭐ 419
A fast multi-threaded k-mer counter
most recent commit 4 months ago
Pyrosetta.notebooks ⭐ 399
Jupyter Notebooks for learning the PyRosetta platform for biomolecular structure prediction and design
most recent commit 3 months ago
Icewater ⭐ 378
16,432 Free Yara rules created by
most recent commit 5 years ago
Dna2json ⭐ 357
Formats your genome file as JSON
dependent packages 4total releases 14most recent commit 7 years agonpm dna2json} Downloads
Genomicspapers ⭐ 350
The Leek group guide to genomics papers
most recent commit 5 years ago
Scg_lib_structs ⭐ 350
Collections of library structure and sequence of popular single cell genomic methods
most recent commit 4 months ago
Bismark ⭐ 335
A tool to map bisulfite converted sequence reads and determine cytosine methylation states
most recent commit 7 months ago
Dna ⭐ 325
dna, dart native access. A lightweight dart to native super channel plugin, You can use it to invoke any native code directly in contextual and chained dart code.
most recent commit 4 years ago
Dna ⭐ 324
dna, dart native access. A lightweight dart to native super channel plugin, You can use it to invoke any native code directly in contextual and chained dart code.
most recent commit 4 years ago
The 10 Most Depended On Dna Open Source Projects
Biopython ⭐ 3,918
Official git repository for Biopython (originally converted from CVS)
dependent packages 1,373total releases 58latest release February 13, 2023most recent commit 3 months agopypi biopython} Downloads
Pyfaidx ⭐ 427
Efficient pythonic random access to fasta subsequences
dependent packages 119total releases 86latest release September 22, 2023most recent commit 3 months agopypi pyfaidx} Downloads
Htsjdk ⭐ 271
A Java API for high-throughput sequencing data (HTS) formats.
dependent packages 87total releases 78latest release October 13, 2023most recent commit 4 months ago
Node Organic ⭐ 55
organic software development in nodejs
dependent packages 44total releases 18latest release January 14, 2016most recent commit 2 years agonpm organic} Downloads
Exceldna ⭐ 1,166
Excel-DNA - Free and easy .NET for Excel. This repository contains the core Excel-DNA library.
dependent packages 31total releases 61latest release November 27, 2023most recent commit 3 months agonuget ExcelDna.Integration} Downloads
Galaxy ⭐ 1,211
Data intensive science for everyone.
dependent packages 23total releases 30latest release December 08, 2023most recent commit 3 months agopypi galaxy-util} Downloads
Dnafeaturesviewer ⭐ 500
:eye: Python library to plot DNA sequence features (e.g. from Genbank files)
dependent packages 22total releases 30latest release November 01, 2023most recent commit 6 months agopypi dna-features-viewer} Downloads
Pyfastx ⭐ 211
a python package for fast random access to sequences from plain and gzipped FASTA/Q files
dependent packages 20total releases 68latest release November 25, 2023most recent commit 5 months agopypi pyfastx} Downloads
Ve Sequence Utils ⭐ 17
DNA/RNA/AA sequence manipulation utility functions
dependent packages 13total releases 229latest release March 20, 2023most recent commit a year agonpm ve-sequence-utils} Downloads
Dna ⭐ 32
🧬 Progressive Web Components.
dependent packages 9total releases 188latest release November 29, 2023most recent commit 3 months agonpm @chialab/dna} Downloads
The 10 Latest Releases In Dna Open Source Projects
Galaxy ⭐ 1,211
Data intensive science for everyone.
dependent packages 23total releases 30latest release December 08, 2023most recent commit 3 months agopypi galaxy-util} Downloads
Nimna ⭐ 8
DNA/RNA folding in Nim
latest release December 08, 2023most recent commit 6 years ago
Algebra ⭐ 10
A Boolean Algebra for Genetic Variants
dependent packages 2total releases 18latest release December 04, 2023most recent commit 3 months agopypi mutalyzer-algebra} Downloads
Dna ⭐ 32
🧬 Progressive Web Components.
dependent packages 9total releases 188latest release November 29, 2023most recent commit 3 months agonpm @chialab/dna} Downloads
Exceldnadoc ⭐ 31
Command-line utility to create a compiled HTML Help Workshop file (.chm) for Excel-DNA
total releases 49latest release November 27, 2023most recent commit a year ago
Intellisense ⭐ 152
Add in-sheet IntelliSense for Excel UDFs
dependent packages 2total releases 57latest release November 27, 2023most recent commit 6 months agonuget ExcelDna.IntelliSense} Downloads
Exceldna ⭐ 1,166
Excel-DNA - Free and easy .NET for Excel. This repository contains the core Excel-DNA library.
dependent packages 31total releases 61latest release November 27, 2023most recent commit 3 months agonuget ExcelDna.Integration} Downloads
Falas ⭐ 6
Fragment-Aware Local Assembly for Short-reads
latest release November 27, 2023most recent commit 5 years ago
Pyfastx ⭐ 211
a python package for fast random access to sequences from plain and gzipped FASTA/Q files
dependent packages 20total releases 68latest release November 25, 2023most recent commit 5 months agopypi pyfastx} Downloads
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