Phat
Pathogen-Host Analysis Tool - A modern Next-Generation Sequencing (NGS) analysis platform
| Project Name | Stars | Downloads | Repos Using This | Packages Using This | Most Recent Commit | Total Releases | Latest Release | Open Issues | License | Language |
|---|---|---|---|---|---|---|---|---|---|---|
| Ngb | 151 | 3 months ago | 290 | mit | Java | |||||
| New Genome Browser (NGB) - a Web - based NGS data viewer with unique Structural Variations (SVs) visualization capabilities, high performance, scalability, and cloud data support | ||||||||||
| Mutscan | 127 | 2 years ago | 4 | mit | C | |||||
| Detect and visualize target mutations by scanning FastQ files directly | ||||||||||
| Fastv | 56 | 4 years ago | 1 | mit | C++ | |||||
| An ultra-fast tool for identification of SARS-CoV-2 and other microbes from sequencing data. This tool can be used to detect viral infectious diseases, like COVID-19. | ||||||||||
| Comparative_genomics | 24 | 3 years ago | 10 | Shell | ||||||
| Micro 612 genomics workshop | ||||||||||
| Ngs Course.github.io | 23 | 7 years ago | cc0-1.0 | HTML | ||||||
| NGS course | ||||||||||
| Phat | 17 | 2 years ago | 62 | gpl-3.0 | TypeScript | |||||
| Pathogen-Host Analysis Tool - A modern Next-Generation Sequencing (NGS) analysis platform | ||||||||||
| Pybioviz | 14 | 7 months ago | 1 | November 28, 2019 | 3 | gpl-3.0 | Jupyter Notebook | |||
| bioinformatics visualization tools with pyviz/bokeh | ||||||||||
| Angsd Wrapper | 13 | 4 years ago | 5 | mit | Shell | |||||
| Utilities for analyzing next generation sequencing data. | ||||||||||
| Chronqc | 13 | 5 years ago | 3 | mit | HTML | |||||
| Manuscript describing ChronQC is now available online in Bioinformatics | ||||||||||
| Mitobench | 6 | 3 years ago | 10 | Java | ||||||
| The mitochondrial workbench | ||||||||||
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