Bam_processing
Process SAM/BAM files accroding to the 1k genomes methods
| Project Name | Stars | Downloads | Repos Using This | Packages Using This | Most Recent Commit | Total Releases | Latest Release | Open Issues | License | Language |
|---|---|---|---|---|---|---|---|---|---|---|
| Transcriptclean | 57 | a year ago | 9 | mit | Python | |||||
| Correct mismatches, microindels, and noncanonical splice junctions in long reads that have been mapped to the genome | ||||||||||
| Irep | 37 | 4 years ago | 17 | February 14, 2018 | 11 | mit | Python | |||
| scripts for estimating bacteria replication rates based on population genome copy number variation | ||||||||||
| K Slam | 20 | 6 years ago | 11 | gpl-3.0 | C++ | |||||
| k-SLAM ultra fast alignment and taxonomic classification of metagenomic datasets | ||||||||||
| Kindel | 18 | 4 years ago | 12 | December 14, 2020 | 9 | gpl-3.0 | Python | |||
| Indel-aware consensus from a SAM/BAM alignment | ||||||||||
| Mcutils | 10 | 3 years ago | 2 | C++ | ||||||
| Bam_processing | 7 | 4 years ago | Shell | |||||||
| Process SAM/BAM files accroding to the 1k genomes methods | ||||||||||
| Cplate | 7 | 8 years ago | 1 | apache-2.0 | Python | |||||
| Digestion template-based deconvolution for chromatin structure inference. | ||||||||||
| Nucbreak | 6 | 5 years ago | 4 | mpl-2.0 | Python | |||||
| Location of structural errors in a genome assembly and structural variations between a pair of genomes | ||||||||||
| Dcns | 6 | 2 years ago | 3 | mit | C++ | |||||
| conserved non-coding sequence | ||||||||||
| Discoplot | 6 | 9 years ago | gpl-3.0 | Python | ||||||
| Visualising discordant reads | ||||||||||
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