Project Name | Stars | Downloads | Repos Using This | Packages Using This | Most Recent Commit | Total Releases | Latest Release | Open Issues | License | Language |
---|---|---|---|---|---|---|---|---|---|---|
Ngb | 151 | 3 months ago | 290 | mit | Java | |||||
New Genome Browser (NGB) - a Web - based NGS data viewer with unique Structural Variations (SVs) visualization capabilities, high performance, scalability, and cloud data support | ||||||||||
Cloud Pipeline | 137 | 3 months ago | 840 | apache-2.0 | Java | |||||
Cloud agnostic genomics analysis, scientific computation and storage platform | ||||||||||
Crispresso | 110 | 1 | 5 years ago | 51 | June 30, 2018 | 1 | agpl-3.0 | Python | ||
Software pipeline for the analysis of CRISPR-Cas9 genome editing outcomes from sequencing data | ||||||||||
Ngseasy | 76 | 7 years ago | 9 | gpl-2.0 | Shell | |||||
Dockerised Next Generation Sequencing Pipeline (QC, Align, Calling, Annotation) | ||||||||||
Asap | 46 | 2 years ago | 7 | gpl-3.0 | Groovy | |||||
A scalable bacterial genome assembly, annotation and analysis pipeline | ||||||||||
Ngs Primerplex | 42 | 10 months ago | 1 | December 20, 2019 | 12 | gpl-3.0 | Python | |||
NGS-PrimerPlex is a high-throughput tool for mupltiplex primer design | ||||||||||
Needlestack | 39 | 4 years ago | 8 | gpl-3.0 | R | |||||
Multi-sample somatic variant caller | ||||||||||
Bio Dockers | 32 | 4 months ago | 1 | Dockerfile | ||||||
:whale: Bio-dockers: dockerized bioinformatic tools | ||||||||||
Gatk4_best_practice | 18 | 6 years ago | ||||||||
GATK4 Best Practice Nextflow Pipeline | ||||||||||
Docker4seq | 18 | 7 months ago | 5 | gpl-3.0 | HTML | |||||
Running NGS computing demanding applications, e.g reads mapping and counting, wrapped in docker containers. |