Project Name	Stars	Most Recent Commit	Open Issues	License	Language
Useq	17	4 months ago			Java
180+ Java applications for analyzing next generation sequencing data from ChIPSeq, RNASeq, BisSeq, DNASeq, variant annotation/ filtering, alignment/VCF QC, capture array design, IGV/ DAS2/IGB/UCSC file manipulation, etc. Both GUI and cmd line interfaces.
Survivor_ant	11	6 years ago	7	mit	HTML
A framework to annotate SVs with previous known SVs (vcf file) and or with genomic features (gff and or bed files)

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Useq ⭐ 17

180+ Java applications for analyzing next generation sequencing data from ChIPSeq, RNASeq, BisSeq, DNASeq, variant annotation/ filtering, alignment/VCF QC, capture array design, IGV/ DAS2/IGB/UCSC file manipulation, etc. Both GUI and cmd line interfaces.

most recent commit 4 months ago

Survivor_ant ⭐ 11

A framework to annotate SVs with previous known SVs (vcf file) and or with genomic features (gff and or bed files)

most recent commit 6 years ago

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