Project Name | Stars | Downloads | Repos Using This | Packages Using This | Most Recent Commit | Total Releases | Latest Release | Open Issues | License | Language |
---|---|---|---|---|---|---|---|---|---|---|
Fastp | 1,602 | 6 months ago | 1 | December 15, 2021 | 309 | mit | C++ | |||
An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...) | ||||||||||
Afterqc | 157 | 6 years ago | 21 | mit | Python | |||||
Automatic Filtering, Trimming, Error Removing and Quality Control for fastq data | ||||||||||
Atropos | 116 | 4 months ago | 25 | other | Python | |||||
An NGS read trimming tool that is specific, sensitive, and speedy. (production) | ||||||||||
Trimmomatic | 74 | 9 years ago | 1 | Java | ||||||
Read trimming tool for Illumina NGS data. | ||||||||||
Atria | 30 | 3 months ago | 1 | other | Julia | |||||
An accurate and ultra-fast adapter and quality trimming program for Illumina Next-Generation Sequencing (NGS) data. | ||||||||||
Rnaseq Nf | 20 | 2 years ago | 4 | gpl-3.0 | HTML | |||||
RNAseq analysis pipeline | ||||||||||
Ngs_workshop_advanced_bioinformatics | 9 | a year ago | ||||||||
Cutprimers | 5 | 4 years ago | 7 | gpl-3.0 | Python | |||||
curPrimers is a tool for trimming primer sequences from amplicon based NGS reads | ||||||||||
Ngs_pipelines | 5 | 9 years ago | bsd-3-clause | Groovy | ||||||
Nextflow-based pipelines for typical NGS processing tasks |