Ngs_workshop_advanced_bioinformatics
Ngs_workshop_advanced_bioinformatics
| Project Name | Stars | Downloads | Repos Using This | Packages Using This | Most Recent Commit | Total Releases | Latest Release | Open Issues | License | Language |
|---|---|---|---|---|---|---|---|---|---|---|
| Deepvariant | 2,978 | 5 months ago | 8 | bsd-3-clause | Python | |||||
| DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data. | ||||||||||
| Fastp | 1,602 | 7 months ago | 1 | December 15, 2021 | 309 | mit | C++ | |||
| An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...) | ||||||||||
| Gatk | 1,576 | 2 | a month ago | 46 | March 16, 2023 | 1,299 | other | Java | ||
| Official code repository for GATK versions 4 and up | ||||||||||
| Galaxy | 1,211 |  | 2 | 23 | 3 months ago | 30 | December 08, 2023 | 2,169 | other | Python |
| Data intensive science for everyone. | ||||||||||
| Htslib | 762 |  | 1 | a month ago | 11 | June 14, 2023 | 160 | other | C | |
| C library for high-throughput sequencing data formats | ||||||||||
| Deeptools | 644 | 19 days ago | 127 | other | Python | |||||
| Tools to process and analyze deep sequencing data. | ||||||||||
| Jvarkit | 440 | 6 months ago | 52 | other | Java | |||||
| Java utilities for Bioinformatics | ||||||||||
| Bioconvert | 344 | 3 | 5 months ago | 34 | July 18, 2023 | 27 | gpl-3.0 | Python | ||
| Bioconvert is a collaborative project to facilitate the interconversion of life science data from one format to another. | ||||||||||
| Juicer | 313 | a year ago | 40 | mit | Shell | |||||
| A One-Click System for Analyzing Loop-Resolution Hi-C Experiments | ||||||||||
| Fgbio | 292 | 3 months ago | 16 | May 16, 2023 | 110 | mit | Scala | |||
| Tools for working with genomic and high throughput sequencing data. | ||||||||||
Alternatives To Ngs_workshop_advanced_bioinformaticsSelect To Compare
Alternative Project Comparisons
Popular Bioinformatics Projects
Popular Ngs Projects
Popular Data Processing Categories
Get A Weekly Email With Trending Projects For These Categories
No Spam. Unsubscribe easily at any time.
Bioinformatics
Ngs
Trimming