Assnake
Snakemake based framework for NGS data analysis and management
| Project Name | Stars | Downloads | Repos Using This | Packages Using This | Most Recent Commit | Total Releases | Latest Release | Open Issues | License | Language |
|---|---|---|---|---|---|---|---|---|---|---|
| Mindthegap | 30 | 2 years ago | 5 | agpl-3.0 | C++ | |||||
| MindTheGap is a SV caller for short read sequencing data dedicated to insertion variants (all sizes and types). It can also be used as a local assembly tool. | ||||||||||
| Jamm | 29 | 4 years ago | 2 | gpl-3.0 | R | |||||
| JAMM Peak Finder for Sequencing Datasets | ||||||||||
| Pheno4j | 24 | 5 years ago | 1 | mit | Java | |||||
| Pheno4j: a graph based HPO to NGS database | ||||||||||
| Nanovar Archived | 17 | 4 years ago | gpl-3.0 | C++ | ||||||
| Archived version 1.0.2 | ||||||||||
| Mix | 11 | 8 years ago | 3 | Python | ||||||
| MIX: Combining multiple assemblies from NGS data | ||||||||||
| Assnake | 10 | 3 years ago | 9 | March 26, 2020 | 10 | other | Python | |||
| Snakemake based framework for NGS data analysis and management | ||||||||||
| Desra | 9 | a year ago | 1 | mit | JavaScript | |||||
| An automated protocol to extract variation or expression from public NGS datasets | ||||||||||
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