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Metagem ⭐ 155

💎 An easy-to-use workflow for generating context specific genome-scale metabolic models and predicting metabolic interactions within microbial communities directly from metagenomic data

Python package to study microbial communities using metabolic modeling.

Isb_course_2022 ⭐ 22

Materials and presentation for the 2022 ISB Microbiome course.

The aim of this repository is to maintain, refine, and expand the AGORA collection of genome-scale metabolic reconstructions for human gut microbes through the use of issues. Please note that pull requests will be automatically closed.

Isb_course_2023 ⭐ 10

Materials and presentation for the 2023 ISB Microbiome course.

Microberx ⭐ 5

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