Agora
The aim of this repository is to maintain, refine, and expand the AGORA collection of genome-scale metabolic reconstructions for human gut microbes through the use of issues. Please note that pull requests will be automatically closed.
| Project Name | Stars | Downloads | Repos Using This | Packages Using This | Most Recent Commit | Total Releases | Latest Release | Open Issues | License | Language |
|---|---|---|---|---|---|---|---|---|---|---|
| Metagem | 155 | 4 months ago | 10 | mit | Python | |||||
| :gem: An easy-to-use workflow for generating context specific genome-scale metabolic models and predicting metabolic interactions within microbial communities directly from metagenomic data | ||||||||||
| Carveme | 117 |  | 2 | 4 months ago | 16 | November 08, 2023 | 33 | other | Python | |
| CarveMe: genome-scale metabolic model reconstruction | ||||||||||
| Raven | 87 | 5 months ago | 7 | other | MATLAB | |||||
| The RAVEN Toolbox for genome scale model reconstruction, curation and analysis. | ||||||||||
| Simsg | 51 | 2 years ago | 2 | apache-2.0 | Python | |||||
| Semantic Image Manipulation using Scene Graphs (CVPR 2020) | ||||||||||
| Cogent | 50 | 3 years ago | 14 | bsd-3-clause-clear | Python | |||||
| Coding Genome Reconstruction using Iso-Seq data | ||||||||||
| Agora | 37 | a year ago | 3 | other | Python | |||||
| Algorithm For Gene Order Reconstruction in Ancestors | ||||||||||
| Corda | 20 | 4 months ago | 14 | March 14, 2018 | 4 | mit | Python | |||
| An implementation of genome-scale model reconstruction using Cost Optimization Reaction Dependency Assessment by Schultz et. al | ||||||||||
| Coreco | 13 | 6 years ago | 2 | Python | ||||||
| Computational method for Comparative ReConstruction of genome-scale metabolic networks | ||||||||||
| Agora | 11 | 3 years ago | 3 | |||||||
| The aim of this repository is to maintain, refine, and expand the AGORA collection of genome-scale metabolic reconstructions for human gut microbes through the use of issues. Please note that pull requests will be automatically closed. | ||||||||||
| Which_tree | 8 | 6 years ago | gpl-2.0 | R | ||||||
| Testing of phylogenetic inference methods | ||||||||||
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