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Search results for sequencing microbiome

9 search results found

Ampliseq ⭐ 141

Amplicon sequencing analysis workflow using DADA2 and QIIME2

Decontam ⭐ 122

Simple statistical identification and removal of contaminants in marker-gene and metagenomics sequencing data

Differential abundance (DA) and correlation analyses for microbial absolute abundance data

Microbiomeutilities ⭐ 29

The is mostly a wrapper tool using phyloseq and microbiome R packages.

Isb_course_2022 ⭐ 22

Materials and presentation for the 2022 ISB Microbiome course.

Ancom Bc Code Archive ⭐ 12

Data, scripts, and outputs for the Nat. Comm. paper "Analysis of Composition of Microbiomes with Bias Correction"

Isb_course_2023 ⭐ 10

Materials and presentation for the 2023 ISB Microbiome course.

16s Rdna V3 V4 ⭐ 8

16S rDNA V3-V4 amplicon sequencing analysis using dada2, phyloseq, LEfSe, picrust2 and other tools. Demo: https://ycl6.github.io/16S-Demo/

Fratjuice ⭐ 5

Uncovering the microbes of fraternity basements

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