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Upgrade Framework

A product-agnostic framework for defining and sequencing upgrades

Categories > Science > Sequencing

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Stars

17

License

other

Most Recent Commit

a year ago

Programming Language

Java

Categories

Programming Languages > Java

Programming Languages > Dsl

Science > Sequencing

Alternatives To Upgrade Framework

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A set of command line tools (in Java) for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF.

dependent packages 12total releases 176most recent commit 4 months ago

RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.

most recent commit 3 months ago

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