Project Name	Stars	Most Recent Commit	Open Issues	License	Language
Neat Genreads	72	3 years ago	25	other	Python
NEAT read simulation tools
Stix	38	3 years ago	3	mit	C
Structural Variant Index
Svv	24	7 years ago	3		Python
Stupid Simple Structural Variant View
Covgen	20	3 years ago	3	mit	Python
Creates a target specific exome_full192.coverage.txt file required by MutSig
Mobicnv	6	7 months ago		gpl-3.0	Python
CNV analysis based on the depth of coverage of Illumina data
Vcf2msa.py	6	a year ago	1	gpl-3.0	Python
Package for writing multiple sequence alignments of pseudo-references from a VCF file with a reference genome

Alternatives To Covgen

Select To Compare

Neat Genreads ⭐ 72

NEAT read simulation tools

most recent commit 3 years ago

Stix ⭐ 38

Structural Variant Index

most recent commit 3 years ago

Svv ⭐ 24

Stupid Simple Structural Variant View

most recent commit 7 years ago

Covgen ⭐ 20

Creates a target specific exome_full192.coverage.txt file required by MutSig

most recent commit 3 years ago

Mobicnv ⭐ 6

CNV analysis based on the depth of coverage of Illumina data

most recent commit 7 months ago

Vcf2msa.py ⭐ 6

Package for writing multiple sequence alignments of pseudo-references from a VCF file with a reference genome

most recent commit a year ago

Suggest An Alternative To CovGen

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Covgen vs Neat Genreads

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