Peat
An ultra fast and accurate paired-end adapter trimmer that needs no a priori adapter sequences.
| Project Name | Stars | Downloads | Repos Using This | Packages Using This | Most Recent Commit | Total Releases | Latest Release | Open Issues | License | Language |
|---|---|---|---|---|---|---|---|---|---|---|
| Fastp | 1,602 | 6 months ago | 1 | December 15, 2021 | 309 | mit | C++ | |||
| An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...) | ||||||||||
| Crispresso2 | 233 | 3 months ago | 24 | other | Python | |||||
| Analysis of deep sequencing data for rapid and intuitive interpretation of genome editing experiments | ||||||||||
| Afterqc | 157 | 6 years ago | 21 | mit | Python | |||||
| Automatic Filtering, Trimming, Error Removing and Quality Control for fastq data | ||||||||||
| Nanofilt | 141 |  | 1 | 1 | a year ago | 34 | February 24, 2021 | 2 | gpl-3.0 | Python |
| Filtering and trimming of long read sequencing data | ||||||||||
| Skewer | 70 | 8 years ago | 34 | mit | C++ | |||||
| Ktrim | 30 | 6 months ago | 5 | C++ | ||||||
| Ktrim: an extra-fast and accurate adapter- and quality-trimmer for sequencing data | ||||||||||
| Long Read Catalog | 23 | a year ago | ||||||||
| catalog for long-read sequencing tools | ||||||||||
| Peat | 20 | 3 years ago | 5 | gpl-2.0 | C++ | |||||
| An ultra fast and accurate paired-end adapter trimmer that needs no a priori adapter sequences. | ||||||||||
| Asap | 10 | 2 years ago | 1 | other | XSLT | |||||
| Amplicon Sequencing Analysis Pipeline | ||||||||||
| Itsxpress | 6 |  | 1 | 1 | 4 months ago | 18 | May 25, 2023 | 14 | other | Python |
| Software to trim the ITS region of FASTQ sequences for amplicon sequencing analysis | ||||||||||
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Adapter
Sequencing
Trimming