Csama
Course material for CSAMA: Statistical Data Analysis for Genome Scale Biology
| Project Name | Stars | Downloads | Repos Using This | Packages Using This | Most Recent Commit | Total Releases | Latest Release | Open Issues | License | Language |
|---|---|---|---|---|---|---|---|---|---|---|
| Ncbi Genome Download | 784 |  | 2 | 6 | 9 months ago | 25 | July 28, 2023 | 38 | apache-2.0 | Python |
| Scripts to download genomes from the NCBI FTP servers | ||||||||||
| Jbrowse | 437 |  | 1 | 2 | a year ago | 30 | July 12, 2019 | 164 | other | JavaScript |
| Full-featured and stable genome browser built with JavaScript and HTML5. | ||||||||||
| Pygeno | 242 | 1 | 4 years ago | 18 | December 15, 2021 | 5 | apache-2.0 | Python | ||
| Personalized Genomics and Proteomics. Main diet: Ensembl, side dishes: SNPs | ||||||||||
| Pyfastx | 211 |  | 3 | 20 | 5 months ago | 68 | November 25, 2023 | 20 | mit | C |
| a python package for fast random access to sequences from plain and gzipped FASTA/Q files | ||||||||||
| Raven | 87 | 5 months ago | 7 | other | MATLAB | |||||
| The RAVEN Toolbox for genome scale model reconstruction, curation and analysis. | ||||||||||
| Csama | 79 | 10 months ago | HTML | |||||||
| Course material for CSAMA: Statistical Data Analysis for Genome Scale Biology | ||||||||||
| Gecko | 54 |  | 1 | 3 months ago | 11 | February 18, 2021 | 10 | mit | MATLAB | |
| Toolbox for including enzyme constraints on a genome-scale model. | ||||||||||
| Appliedgenomics2017 | 49 | 6 years ago | mit | HTML | ||||||
| JHU EN.600.649: Computational Genomics: Applied Comparative Genomics | ||||||||||
| Awesome Biological Visualizations | 41 | 3 years ago | cc0-1.0 | |||||||
| A list of web-based interactive biological data visualizations. | ||||||||||
| Genomegraphs.jl | 29 | 4 years ago | 1 | other | Julia | |||||
| A modern genomics framework for julia | ||||||||||
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