Awesome Open Source
Search
Programming Languages
Languages
All Categories
Categories
About
Search results for nanopore pacbio
nanopore
x
pacbio
x
21 search results found
Sniffles
⭐
479
Structural variation caller using third generation sequencing
Wtdbg2
⭐
401
Redbean: A fuzzy Bruijn graph approach to long noisy reads assembly
Shasta
⭐
269
[MOVED] Moved to paoloshasta/shasta. De novo assembly from Oxford Nanopore reads
Clair3
⭐
191
Clair3 - Symphonizing pileup and full-alignment for high-performance long-read variant calling
Gtz
⭐
156
A high performance and compression ratio compressor for genomic data, powered by GTXLab of Genetalks.
Winnowmap
⭐
131
Long read / genome alignment software
Isoquant
⭐
98
Transcript discovery and quantification with long RNA reads (Nanopores and PacBio)
Xtea
⭐
70
Comprehensive TE insertion identification with WGS/WES data from multiple sequencing technics
Lorean
⭐
62
Long Reads Annotation pipeline
Wengan
⭐
57
An accurate and ultra-fast hybrid genome assembler
Mpgap
⭐
51
Multi-platform genome assembly pipeline for Illumina, Nanopore and PacBio reads
Gala
⭐
45
Long-reads Gap-free Chromosome-scale Assembler
Clairs
⭐
42
ClairS - a deep-learning method for long-read somatic small variant calling
Haslr
⭐
39
A fast tool for hybrid genome assembly of long and short reads
Mmlong2
⭐
26
An all-in-one genome-centric metagenomics workflow using long reads
Awesome Sequencing Tech Papers
⭐
26
A collection of publications on comparison of high-throughput sequencing technologies.
Tiptoft
⭐
20
Predict plasmids from uncorrected long read data
Clairs To
⭐
18
ClairS-TO - a deep-learning method for tumor-only somatic SNV calling
Fast Sg
⭐
16
Fast-SG: An alignment-free algorithm for ultrafast scaffolding graph construction from short or long reads.
Sandy
⭐
14
A straightforward and complete next-generation sequencing read simulator
Pistis
⭐
5
Quality control plotting for long reads
Related Searches
Python Nanopore (59)
Bioinformatics Nanopore (31)
Sequencing Nanopore (24)
Bioinformatics Pacbio (23)
Pipeline Nanopore (22)
Python Pacbio (21)
Genome Nanopore (19)
Long Reads Pacbio (18)
Assembly Pacbio (17)
Genome Pacbio (16)
1-21 of 21 search results
Privacy
|
About
|
Terms
|
Follow Us On Twitter
Copyright 2018-2024 Awesome Open Source. All rights reserved.