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bioinformatics
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18 search results found
Sniffles
⭐
479
Structural variation caller using third generation sequencing
Hifiasm
⭐
443
Hifiasm: a haplotype-resolved assembler for accurate Hifi reads
Isoquant
⭐
98
Transcript discovery and quantification with long RNA reads (Nanopores and PacBio)
Dentist
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44
Close assembly gaps using long-reads at high accuracy.
Swan_vis
⭐
43
A Python library to visualize and analyze long-read transcriptomes
Clairs
⭐
42
ClairS - a deep-learning method for long-read somatic small variant calling
Haslr
⭐
39
A fast tool for hybrid genome assembly of long and short reads
Lordfast
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31
Sensitive and Fast Alignment Search Tool for Long Read sequencing Data.
Awesome Sequencing Tech Papers
⭐
26
A collection of publications on comparison of high-throughput sequencing technologies.
Mmlong2
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26
An all-in-one genome-centric metagenomics workflow using long reads
Ngs Preprocess
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23
A pipeline for preprocessing NGS data from Illumina, Nanopore and PacBio technologies
Lrbinner
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22
LRBinner is a long-read binning tool published in WABI 2021 proceedings and AMB.
Tiptoft
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20
Predict plasmids from uncorrected long read data
Clairs To
⭐
18
ClairS-TO - a deep-learning method for tumor-only somatic SNV calling
Isotools
⭐
15
IsoTools is a python module for Long Read Transcriptome Sequencing (LRTS) analysis.
Kit4b
⭐
5
A fully integrated K-mer Informed Toolkit for Bioinformatics
Pacrat
⭐
5
Improving long-read barcode-variant mapping using multiple sequence alignment.
Pistis
⭐
5
Quality control plotting for long reads
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1-18 of 18 search results
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