Uncurl_python
UNCURL is a tool for single cell RNA-seq data analysis.
| Project Name | Stars | Downloads | Repos Using This | Packages Using This | Most Recent Commit | Total Releases | Latest Release | Open Issues | License | Language |
|---|---|---|---|---|---|---|---|---|---|---|
| Sigprofilermatrixgenerator | 91 |  | 1 | 10 | 3 months ago | 102 | October 02, 2023 | 5 | bsd-2-clause | Python |
| SigProfilerMatrixGenerator creates mutational matrices for all types of somatic mutations. It allows downsizing the generated mutations only to parts for the genome (e.g., exome or a custom BED file). The tool seamlessly integrates with other SigProfiler tools. | ||||||||||
| Hic2cool | 50 |  | 1 | 5 months ago | 29 | November 14, 2023 | 16 | mit | Python | |
| Lightweight converter between hic and cool contact matrices. | ||||||||||
| Sigprofilermatrixgeneratorr | 17 | a year ago | 2 | bsd-2-clause | R | |||||
| R wrapper for utilizing the SigProfilerMatrixGenerator framework | ||||||||||
| Hicreppy | 14 | a year ago | 1 | gpl-3.0 | Python | |||||
| Python reimplementation of hicrep with compatibility for sparse matrices | ||||||||||
| Uncurl_python | 14 | 2 | 2 years ago | 12 | June 27, 2022 | mit | Jupyter Notebook | |||
| UNCURL is a tool for single cell RNA-seq data analysis. | ||||||||||
| Mbpls | 10 |  | 2 | 4 years ago | 15 | October 30, 2018 | bsd-3-clause | Python | ||
| (Multiblock) Partial Least Squares Regression for Python | ||||||||||
| Programming For Bioinformatics | 10 | 4 years ago | 3 | mit | Python | |||||
| Rnaseq | 8 | a year ago | 1 | gpl-3.0 | Groovy | |||||
| Fast RNAseq pipeline | ||||||||||
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