Project Name | Stars | Downloads | Repos Using This | Packages Using This | Most Recent Commit | Total Releases | Latest Release | Open Issues | License | Language |
---|---|---|---|---|---|---|---|---|---|---|
Krakenuniq | 201 | 3 months ago | 107 | gpl-3.0 | C++ | |||||
🐙 KrakenUniq: Metagenomics classifier with unique k-mer counting for more specific results | ||||||||||
Deepecg | 187 | a year ago | mit | Python | ||||||
ECG classification programs based on ML/DL methods | ||||||||||
Pyani | 140 | 2 | 1 | 2 years ago | 18 | July 27, 2022 | 48 | mit | Python | |
Application and Python module for average nucleotide identity analyses of microbes. | ||||||||||
Taxprofiler | 78 | 3 months ago | 42 | mit | Nextflow | |||||
Highly parallelised multi-taxonomic profiling of shotgun short- and long-read metagenomic data | ||||||||||
Bonsai | 68 | 9 months ago | 3 | mit | C++ | |||||
Bonsai: Fast, flexible taxonomic analysis and classification | ||||||||||
Higitclass | 62 | 8 months ago | 1 | apache-2.0 | Python | |||||
HiGitClass: Keyword-Driven Hierarchical Classification of GitHub Repositories (ICDM'19) | ||||||||||
Deepmicrobes | 61 | 2 years ago | 11 | apache-2.0 | Python | |||||
DeepMicrobes: taxonomic classification for metagenomics with deep learning | ||||||||||
Woltka | 58 | 4 months ago | 4 | December 26, 2022 | 46 | bsd-3-clause | Python | |||
Woltka: a versatile meta'omic data classifier | ||||||||||
Cello | 53 | 10 months ago | 7 | September 28, 2022 | 10 | mit | Jupyter Notebook | |||
CellO: Gene expression-based hierarchical cell type classification using the Cell Ontology | ||||||||||
Metacache | 49 | a year ago | 8 | gpl-3.0 | C++ | |||||
memory efficient, fast & precise taxnomomic classification system for metagenomic read mapping |