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12 search results found

Krakenuniq ⭐ 201

🐙 KrakenUniq: Metagenomics classifier with unique k-mer counting for more specific results

Application and Python module for average nucleotide identity analyses of microbes.

Bonsai: Fast, flexible taxonomic analysis and classification

Tesorter ⭐ 59

TEsorter: an accurate and fast method to classify LTR-retrotransposons in plant genomes

Woltka: a versatile meta'omic data classifier

Metacache ⭐ 49

memory efficient, fast & precise taxnomomic classification system for metagenomic read mapping

fast classification of metagenomic sequences with lightweight de Bruijin graph-based reference indexing

A fast, user-friendly analysis and evaluation toolkit for some DNA sequence classification tasks

Metagenomic classifier for CUDA-enabled GPUs

K2Mem is a variant of Kraken 2 taxonomic sequence classification system that can learn from the previous classifications.

Ancestry_viz ⭐ 5

GTM and t-SNE classification and clustering of 1000 Genomes Project populations

Retrieve annotated intron sequences and classify them as minor (U12-type) or major (U2-type) using a support vector-machine model.

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