Project Name | Stars | Downloads | Repos Using This | Packages Using This | Most Recent Commit | Total Releases | Latest Release | Open Issues | License | Language |
---|---|---|---|---|---|---|---|---|---|---|
Galaxy | 1,211 | 2 | 23 | 4 months ago | 30 | December 08, 2023 | 2,169 | other | Python | |
Data intensive science for everyone. | ||||||||||
Scrna Seq_notes | 478 | 5 months ago | mit | R | ||||||
A list of scRNA-seq analysis tools | ||||||||||
Juicer | 313 | a year ago | 40 | mit | Shell | |||||
A One-Click System for Analyzing Loop-Resolution Hi-C Experiments | ||||||||||
Sarek | 299 | 4 months ago | 180 | mit | Nextflow | |||||
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing | ||||||||||
Bedops | 244 | 2 years ago | 1 | March 03, 2021 | 17 | other | C | |||
:microscope: BEDOPS: high-performance genomic feature operations | ||||||||||
Flowcraft | 234 | 4 years ago | 18 | March 02, 2019 | 39 | gpl-3.0 | Python | |||
FlowCraft: a component-based pipeline composer for omics analysis using Nextflow. :whale::package: | ||||||||||
Aws Batch Genomics | 181 | 4 years ago | 5 | apache-2.0 | Python | |||||
Software sets up and runs an genome sequencing analysis workflow using AWS Batch and AWS Step Functions. | ||||||||||
Gatk Sv | 148 | 4 months ago | 101 | bsd-3-clause | Python | |||||
A structural variation pipeline for short-read sequencing | ||||||||||
Cloud Pipeline | 137 | 4 months ago | 840 | apache-2.0 | Java | |||||
Cloud agnostic genomics analysis, scientific computation and storage platform | ||||||||||
Viral Ngs | 129 | 4 years ago | 60 | other | Python | |||||
Viral genomics analysis pipelines |