Project Name | Stars | Downloads | Repos Using This | Packages Using This | Most Recent Commit | Total Releases | Latest Release | Open Issues | License | Language |
---|---|---|---|---|---|---|---|---|---|---|
Deepvariant | 2,978 | 5 months ago | 8 | bsd-3-clause | Python | |||||
DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data. | ||||||||||
Clairvoyante | 142 | 3 years ago | bsd-3-clause | Python | ||||||
Clairvoyante: a multi-task convolutional deep neural network for variant calling in Single Molecule Sequencing | ||||||||||
Mirdeep2 | 120 | 5 months ago | 2 | gpl-3.0 | Perl | |||||
Discovering known and novel miRNAs from small RNA sequencing data | ||||||||||
Deepsimulator | 76 | 4 years ago | 8 | C | ||||||
The first deep learning based Nanopore simulator which can simulate the process of Nanopore sequencing. | ||||||||||
Deepnovo | 67 | 3 years ago | 1 | other | Python | |||||
Protein Identification with Deep Learning | ||||||||||
Deepsomatic | 45 | 6 months ago | bsd-3-clause | |||||||
DeepSomatic is an analysis pipeline that uses a deep neural network to call somatic variants from tumor-normal sequencing data. | ||||||||||
Deeprepeat | 15 | a year ago | 5 | other | C | |||||
An accurate repeat detection from Nanopore data using deep learning and image techniques | ||||||||||
Sars Cov 2_sequencing | 13 | 4 years ago | gpl-3.0 | Jupyter Notebook | ||||||
SARS-CoV-2 Deep Sequencing | ||||||||||
Mimsi | 12 | 2 years ago | 1 | March 26, 2021 | gpl-3.0 | Python | ||||
Microsatellite Instability Classification using Multiple Instance Learning | ||||||||||
Deep Learning For Genomics | 5 | 7 years ago | Python | |||||||
Using deep learning methods on single-cell sequencing data for classification of cell types |