Clairvoyante
Clairvoyante: a multi-task convolutional deep neural network for variant calling in Single Molecule Sequencing
| Project Name | Stars | Downloads | Repos Using This | Packages Using This | Most Recent Commit | Total Releases | Latest Release | Open Issues | License | Language |
|---|---|---|---|---|---|---|---|---|---|---|
| Clairvoyante | 142 | 3 years ago | bsd-3-clause | Python | ||||||
| Clairvoyante: a multi-task convolutional deep neural network for variant calling in Single Molecule Sequencing | ||||||||||
| Migec | 40 | 10 months ago | 28 | other | Groovy | |||||
| A RepSeq processing swiss-knife | ||||||||||
| Kineticstools | 16 | 2 years ago | 39 | Python | ||||||
| Tools for detecting DNA modifications from single molecule, real-time sequencing data | ||||||||||
| Singlecellmultiomics | 15 | 10 months ago | 24 | September 19, 2022 | 2 | mit | Python | |||
| Tools which deal with multiple single cell measurements | ||||||||||
| Inc Seq | 10 | 4 years ago | 1 | other | Python | |||||
| INC-Seq: Accurate single molecule reads using nanopore sequencing | ||||||||||
| Trumicount | 8 | 3 years ago | 1 | agpl-3.0 | TeX | |||||
| Correctly counting molecules using unique molecular identifiers (UMIs) | ||||||||||
| Smalr | 7 | 6 years ago | 7 | other | Python | |||||
| SMALR: a framework for single-molecule level interrogation of the methylation status of SMRT reads. | ||||||||||
| Fast5tools | 6 | 2 years ago | 2 | mit | Python | |||||
| Tools for working with fast5 files (nanopore data). | ||||||||||
| Smrter | 6 | 5 years ago | 3 | R | ||||||
| Single Molecule Real Time sequencing Epigenetic Refinement | ||||||||||
| Rrna_nanoshape | 5 | 3 years ago | gpl-3.0 | Jupyter Notebook | ||||||
| Code accompanying "Direct detection of RNA modifications and structure using single molecule nanopore sequencing" | ||||||||||
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