Palimpsest
An R package for studying mutational signatures and structural variant signatures along clonal evolution in cancer.
| Project Name | Stars | Downloads | Repos Using This | Packages Using This | Most Recent Commit | Total Releases | Latest Release | Open Issues | License | Language |
|---|---|---|---|---|---|---|---|---|---|---|
| Cbioportal | 535 | 3 months ago | 495 | agpl-3.0 | Java | |||||
| cBioPortal for Cancer Genomics | ||||||||||
| Ideogram | 265 |  | 5 | 8 | 3 months ago | 76 | September 05, 2023 | 32 | other | JavaScript |
| Chromosome visualization for the web | ||||||||||
| Lollipops | 175 | 6 months ago | 13 | October 05, 2023 | 2 | gpl-3.0 | Go | |||
| Lollipop-style mutation diagrams for annotating genetic variations. | ||||||||||
| Genome Spy | 150 |  | 3 | 3 months ago | 41 | November 24, 2023 | 66 | mit | JavaScript | |
| A visualization grammar and GPU-accelerated toolkit for genomic data | ||||||||||
| Palimpsest | 56 | 3 years ago | 23 | R | ||||||
| An R package for studying mutational signatures and structural variant signatures along clonal evolution in cancer. | ||||||||||
| Sigprofilerplotting | 43 |  | 2 | 9 | 5 months ago | 86 | November 18, 2023 | bsd-2-clause | Python | |
| SigProfilerPlotting provides a standard tool for displaying all types of mutational signatures as well as all types of mutational patterns in cancer genomes. The tool seamlessly integrates with other SigProfiler tools. | ||||||||||
| Biocancer | 15 | a year ago | 1 | other | R | |||||
| :cancer: :free: A Shiny App for Interactive Multi-OMICS Cancer Data Visualization and analysis | ||||||||||
| Webgen | 8 | 7 months ago | 22 | JavaScript | ||||||
| WebGen Vertically Integrated Project | ||||||||||
| Oncothreads | 8 | 3 years ago | 5 | mit | JavaScript | |||||
| OncoThreads longitudinal cancer genomics visualization project. | ||||||||||
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R
Visualization
Bioinformatics
Genomics
Cancer Genomics