Lariat
| Project Name | Stars | Downloads | Repos Using This | Packages Using This | Most Recent Commit | Total Releases | Latest Release | Open Issues | License | Language |
|---|---|---|---|---|---|---|---|---|---|---|
| Souporcell | 134 | 7 months ago | 99 | mit | Python | |||||
| Clustering scRNAseq by genotypes | ||||||||||
| Subset Bam | 53 | 8 months ago | 23 | mit | Rust | |||||
| Grocsvs | 32 | 4 years ago | 4 | mit | Python | |||||
| Genome-wide reconstruction of complex structural variants | ||||||||||
| Lariat | 21 | 5 years ago | 10 | mit | Go | |||||
| Linked-Read Alignment Tool | ||||||||||
| Smcounter | 18 | 5 years ago | 1 | mit | Python | |||||
| smCounter: a versatile UMI-aware variant caller to detect both somatic and germline SNVs and indels. Published in article "Detecting very low allele fraction variants using targeted DNA sequencing and a novel molecular barcode-aware variant caller", BMC Genomics, 2017 18:5. https://bmcgenomics.biomedcentral.com/articles/10.1186/s12864-016-3425-4 | ||||||||||
| Hash10x | 14 | 4 years ago | 1 | apache-2.0 | C | |||||
| a toolset for efficient analysis of 10X Genomics linked read data sets, in particular for de novo assembly | ||||||||||
| Topsorter | 10 | 7 years ago | 1 | Python | ||||||
| Graphical assessment of structrial variants using 10x genomics data | ||||||||||
| Genetools | 10 | 10 months ago | 6 | January 15, 2022 | 17 | mit | Python | |||
| python genetics/genomics utilities | ||||||||||
| Arks | 9 | 4 years ago | C++ | |||||||
| 🌈Alignment-free scaffolding of genome assemblies with 10x Genomics Chromium reads | ||||||||||
| Structural_variants_cshl | 7 | 7 years ago | mit | Perl | ||||||
Alternatives To LariatSelect To Compare
Alternative Project Comparisons
Popular Genomics Projects
Popular Barcode Projects
Popular Science Categories
Get A Weekly Email With Trending Projects For These Categories
No Spam. Unsubscribe easily at any time.
Golang
Genomics
Barcode