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Search results for spatial transcriptomics visium

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8 search results found

Spatiallibd ⭐ 53

Code for the spatialLIBD R/Bioconductor package and shiny app

Humanpilot ⭐ 34

Spatial Transcriptomics human DLPFC pilot study part of the spatialLIBD project

Spatialtranscriptomics ⭐ 34

Pipeline for processing spatially-resolved gene counts with spatial coordinates and image data. Designed for 10x Genomics Visium transcriptomics.

Pipeline for SpatialTranscriptomics and 10X Visium data

Cellscopes.jl ⭐ 9

A Julia package for single cell and spatial data analysis

Spatialdlpfc ⭐ 7

spatialDLPFC project involving Visium (n = 30), Visium SPG (n = 4) and snRNA-seq (n = 19) samples

Spatial Transcriptomics Quantification pipeline for 10x Visium and H&E-stained whole slide images

St_pipeline ⭐ 6

ST Pipeline contains the tools and scripts needed to process and analyze the raw files generated with the Spatial Transcriptomics method in FASTQ format.

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1-8 of 8 search results

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