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28 search results found

Spikeinterface ⭐ 388

A Python-based module for creating flexible and robust spike sorting pipelines.

Kilosort ⭐ 382

Fast spike sorting with drift correction for up to a thousand channels

Parameterizing neural power spectra into periodic & aperiodic components.

Bluepyopt ⭐ 190

Blue Brain Python Optimisation Library

Elephant ⭐ 174

Elephant is the Electrophysiology Analysis Toolkit

Spectral_connectivity ⭐ 109

Frequency domain estimation and functional and directed connectivity analysis tools for electrophysiological data

pyABF is a Python package for reading electrophysiology data from Axon Binary Format (ABF) files

Cellexplorer ⭐ 81

CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cells acquired using extracellular electrodes.

Electrophys Feature Extraction Library

Spyglass ⭐ 50

Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF

Real-time position tracker for behavioral research

Spectravis ⭐ 38

An interactive web-based neuroscience app for analyzing task-related functional networks over time and frequency

Combinato ⭐ 36

Automatic spike sorting, cluster visualization, spike sorting GUIs

Acquisition Board ⭐ 35

Hardware interface for streaming up to 512 channels of neural data via USB

Python tools for analysis of neurophysiology data

Pinpoint ⭐ 32

Multi-probe trajectory planning in an intuitive 3D environment

Neuroelectrophysiology object model and data analysis in Python.

Neuroglia ⭐ 30

a Python machine learning library for neurophysiology data

Neuroshapes ⭐ 29

Open schemas for F.A.I.R. neuroscience data

Neurotic ⭐ 25

Curate, visualize, annotate, and share your behavioral ephys data using Python

ONI-compatible hardware, firmware, and host APIs for advanced neuroscience experiments.

Braintime ⭐ 14

Brain Time Toolbox: Warp electrophysiological data from clock time to brain time and analyze the dynamic neural patterns of cognitive processes.

a graphical tool for generating hybrid ground-truth spiking data for evaluating spike sorting performance

Electrocuda ⭐ 7

Robust electrophysiology tools with GPU acceleration

a Python toolbox for reproducible analysis and visualization of NeuroPhysiological data.

EARS: Electrophysiology Auditory Recording System

'minis' is a software for electrophysiological data analysis. It allows you to detect and analyse spontaneous postsynaptic potetnials/currents in whole-cell patch clamp recordings and to estimate the quantal size in the central synapse.

SORTED: a curated list of interesting science ideas and links (cognitive/neuro & data science)

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1-28 of 28 search results

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