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neuroscience
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589 search results found
Course Content
⭐
2,527
NMA Computational Neuroscience course
Mne Python
⭐
2,449
MNE: Magnetoencephalography (MEG) and Electroencephalography (EEG) in Python
Psychopy
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1,555
For running psychology and neuroscience experiments
Brainflow
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1,138
BrainFlow is a library intended to obtain, parse and analyze EEG, EMG, ECG and other kinds of data from biosensors
Awesome Neuroscience
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974
A curated list of awesome neuroscience libraries, software and any content related to the domain.
Snntorch
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935
Deep and online learning with spiking neural networks in Python
Brian2
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838
Brian is a free, open source simulator for spiking neural networks.
Awesome Neural Geometry
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785
A curated collection of resources and research related to the geometry of representations in the brain, deep networks, and beyond
Fieldtrip
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782
The MATLAB toolbox for MEG, EEG and iEEG analysis
Nengo
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781
A Python library for creating and simulating large-scale brain models
Dcm2niix
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746
dcm2nii DICOM to NIfTI converter: compiled versions available from NITRC
Braindecode
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638
Deep learning software to decode EEG, ECG or MEG signals
Precourse
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587
A repo for the pre-course work at home exercises
Moabb
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546
Mother of All BCI Benchmarks
Csinva.github.io
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515
Slides, paper notes, class notes, blog posts, and research on ML 📉, statistics 📊, and AI 🤖.
Open Computational Neuroscience Resources
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481
A publicly-editable collection of open computational neuroscience resources
Brainrender
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480
a python based software for visualization of neuroanatomical and morphological data.
Lava
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471
A Software Framework for Neuromorphic Computing
Brainpy
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438
Brain Dynamics Programming in Python
Kilosort
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406
Fast spike sorting with drift correction for up to a thousand channels
Spikeinterface
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388
A Python-based module for creating flexible and robust spike sorting pipelines.
Eyeloop
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383
EyeLoop is a Python 3-based eye-tracker tailored specifically to dynamic, closed-loop experiments on consumer-grade hardware.
Neurolib
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369
Easy whole-brain modeling for computational neuroscientists 🧠💻👩🏿🔬
Nrn
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351
NEURON Simulator
Pyphi
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345
A toolbox for integrated information theory.
Awesome Neuro Ai Papers
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345
Papers from the intersection of deep learning and neuroscience
Neurodocker
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323
Generate custom Docker and Singularity images, and minimize existing containers
Brainiak
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315
Brain Imaging Analysis Kit
Neurotech Course
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312
CS198-96: Intro to Neurotechnology @ UC Berkeley
Fooof
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307
Parameterizing neural power spectra into periodic & aperiodic components.
Suite2p
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306
cell detection in calcium imaging recordings
Brayns
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284
Visualizer for large-scale and interactive ray-tracing of neurons
Ed4
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266
Computational Cognitive Neuroscience, Fourth Edition
Neurokit.py
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253
A Python Toolbox for Statistics and Neurophysiological Signal Processing (EEG, EDA, ECG, EMG...).
Bmtk
⭐
246
Brain Modeling Toolkit
Erplab
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237
ERPLAB Toolbox is a free, open-source Matlab package for analyzing ERP data. It is tightly integrated with EEGLAB Toolbox, extending EEGLAB’s capabilities to provide robust, industrial-strength tools for ERP processing, visualization, and analysis. A graphical user interface makes it easy for beginners to learn, and Matlab scripting provides enormous power for intermediate and advanced users.
Nupic.torch
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230
Numenta Platform for Intelligent Computing PyTorch libraries
Opensesame
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226
Graphical experiment builder for the social sciences
Nitime
⭐
223
Timeseries analysis for neuroscience data
Neurogym
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219
A curated collection of neuroscience tasks with a common interface.
Recursos Neuro
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215
Repositorio con recursos de Neurociencia Cognitiva y computacional con amplitud temática.
Antropy
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203
AntroPy: entropy and complexity of (EEG) time-series in Python
Euclidean Distance Transform 3d
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201
Euclidean distance & signed distance transform for multi-label 3D anisotropic images using marching parabolas.
Clinica
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201
Software platform for clinical neuroimaging studies
Dvid
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196
Distributed, Versioned, Image-oriented Dataservice
Tapas
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194
TAPAS - Translational Algorithms for Psychiatry-Advancing Science
Neuromorphic Computing Guide
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191
Learn about the Neumorphic engineering process of creating large-scale integration (VLSI) systems containing electronic analog circuits to mimic neuro-biological architectures.
Bluepyopt
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190
Blue Brain Python Optimisation Library
Org.geppetto
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184
Geppetto is an open-source platform to build web-based applications to visualize and simulate neuroscience data and models.
Deepeeg
⭐
180
Deep Learning with Tensor Flow for EEG MNE Epoch Objects
Elephant
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174
Elephant is the Electrophysiology Analysis Toolkit
B Soid
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172
Behavioral segmentation of open field in DeepLabCut, or B-SOID ("B-side"), is a pipeline that pairs unsupervised pattern recognition with supervised classification to achieve fast predictions of behaviors that are not predefined by users.
Cellfinder
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172
Automated 3D cell detection in very large images
Catmaid
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167
Collaborative Annotation Toolkit for Massive Amounts of Image Data
Awesome Computational Neuroscience
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166
A list of schools and researchers in computational neuroscience
Workbench
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163
Connectome Workbench
Pynwb
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161
A Python API for working with Neurodata stored in the NWB Format
Dcm2bids
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152
Reorganising NIfTI files from dcm2niix into the Brain Imaging Data Structure
Pytorch_connectomics
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151
PyTorch Connectomics: segmentation toolbox for EM connectomics
Neurosummerschools
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150
List of summer schools in neuroscience and related fields
Python Meegkit
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149
🔧🧠 MEEGkit: MEG & EEG processing toolkit in Python
Eegrunt
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147
A Collection Python EEG (+ ECG) Analysis Utilities for OpenBCI and Muse
Facemap
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147
Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes singular value decomposition (SVD) of behavioral videos.
Mne Cpp
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143
MNE-CPP: A Framework for Electrophysiology
Visbrain
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143
A multi-purpose GPU-accelerated open-source suite for brain data visualization
Vame
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140
Variational Animal Motion Embedding - A tool for time series embedding and clustering
Rastermap
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140
a visualization method for neural data
Cleanbib
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136
Probabilistically assign gender and race proportions of first/last authors pairs in bibliography entries
Artificial Intelligence And Machine Learning
⭐
135
A repository for implementation of artificial intelligence algorithm which includes machine learning and deep learning algorithm as well as classical AI search algorithm
Ratinabox
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135
A python package for modelling locomotion in complex environments and spatially/velocity selective cell activity.
Canlabcore
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135
Core tools required for running Canlab Matlab toolboxes. The heart of this toolbox is object-oriented tools that enable interactive analysis of neuroimaging data and simple scripts using high-level commands tailored to neuroimaging analysis.
Regularized Linear Autoencoders
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132
Loss Landscapes of Regularized Linear Autoencoders
Uncertainpy
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131
Uncertainpy: a Python toolbox for uncertainty quantification and sensitivity analysis, tailored towards computational neuroscience.
Analyzing_neural_time_series
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124
python implementations of Analyzing Neural Time Series Textbook
Coreneuron
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122
Simulator optimized for large scale neural network simulations.
Sims
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119
simulations for the Computational Cognitive Neuroscience textbook
Miniscope V4
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113
All things Miniscope v4
Nsci801 Quantneuro
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112
NSCI 801 (Queen's U) Quantitative Neuroscience course materials
Mne Bids
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110
MNE-BIDS is a Python package that allows you to read and write BIDS-compatible datasets with the help of MNE-Python.
Psycho.r
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110
An R package for experimental psychologists
Spectral_connectivity
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109
Frequency domain estimation and functional and directed connectivity analysis tools for electrophysiological data
Expyriment
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109
Platform-independent lightweight Python library for designing and conducting timing-critical behavioural and neuroimaging experiments
Epfl
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108
EPFL summaries & cheatsheets over 5 years (computer science, communication systems, data science and computational neuroscience).
Pyprep
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106
A Python implementation of the Preprocessing Pipeline (PREP) for EEG data
Machine_learning_and_neuroscience
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106
This is the code for "Machine Learning & Neuroscience" By Siraj Raval on Youtube
Mne Bids Pipeline
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106
Automatically process entire electrophysiological datasets using MNE-Python.
Brainreg
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103
Automated 3D brain registration with support for multiple species and atlases.
Mi Eeg 1d Cnn
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102
A new approach based on a 10-layer one-dimensional convolution neural network (1D-CNN) to classify five brain states (four MI classes plus a 'baseline' class) using a data augmentation algorithm and a limited number of EEG channels. Paper: https://doi.org/10.1088/1741-2552/ac4430
Neuropythy
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102
A neuroscience library for Python, intended to complement the existing nibabel library.
Nn Brain
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102
Tutorial codes for modeling brains with neural nets
Wave_clus
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102
A fast and unsupervised algorithm for spike detection and sorting using wavelets and super-paramagnetic clustering
Arbor
⭐
98
The Arbor multi-compartment neural network simulation library.
Twpca
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98
🕝 Time-warped principal components analysis (twPCA)
Bg Atlasapi
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97
A lightweight python module to interact with atlases for systems neuroscience
Tnn
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94
Biologically-realistic recurrent convolutional neural networks
Braingraph
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94
Graph theory analysis of brain MRI data
Nupic.research
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94
Experimental algorithms. Unsupported.
Pcntoolkit
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91
Toolbox for normative modelling and spatial inference of neuroimaging data. https://pcntoolkit.readthedocs.io/en/latest/
Cochlea
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91
Inner ear models for Python
Studio
⭐
91
neuromore Studio is your all-in-one biofeedback suite
1-100 of 589 search results
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