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Search results for matlab neuroscience

78 search results found

Awesome Neuroscience ⭐ 974

A curated list of awesome neuroscience libraries, software and any content related to the domain.

Fieldtrip ⭐ 782

The MATLAB toolbox for MEG, EEG and iEEG analysis

ERPLAB Toolbox is a free, open-source Matlab package for analyzing ERP data. It is tightly integrated with EEGLAB Toolbox, extending EEGLAB’s capabilities to provide robust, industrial-strength tools for ERP processing, visualization, and analysis. A graphical user interface makes it easy for beginners to learn, and Matlab scripting provides enormous power for intermediate and advanced users.

TAPAS - Translational Algorithms for Psychiatry-Advancing Science

Canlabcore ⭐ 135

Core tools required for running Canlab Matlab toolboxes. The heart of this toolbox is object-oriented tools that enable interactive analysis of neuroimaging data and simple scripts using high-level commands tailored to neuroimaging analysis.

Wave_clus ⭐ 102

A fast and unsupervised algorithm for spike detection and sorting using wavelets and super-paramagnetic clustering

Cellexplorer ⭐ 81

CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cells acquired using extracellular electrodes.

MATLAB application for fNIRS data processing and visualization

Micaopen ⭐ 58

Open Scripts and pipelines from the Multimodal Imaging and Connectome Analysis Lab at the Montreal Neurological Institute

Braineigenmodes ⭐ 57

Code supporting 'Geometric constraints on human brain function'

IBL core shared libraries

SPM (Statistical Parametric Mapping) - Development Version

Opticka is an experiment manager built on top of the Psychophysics toolbox (PTB) for MATLAB. It runs experimental tasks using flexible state machine logic and easily does dynamic methods-of-constants type experiments with full behavioural control. It uses a class system to create simple to use visual stimuli using experimenter friendly units. Opticka can use an Eyelink eyetracker, Plexon Omniplex neurophysiology data collection and general TTL control using either a cheap LabJack (ms precision)

Quicknatv2 ⭐ 47

Fast Whole Brain Segmentation (Layers, codes and Pre-trained Models)

Letswave6 ⭐ 47

Letswave 6 - Matlab EEG signal processing toolbox

All-in-one toolbox for processing of magnetic resonance spectroscopy data.

Stringer Pachitariu Et Al 2018b ⭐ 40

Responses of 10,000 neurons to 2,800 natural images

Computational Neuroscience ⭐ 37

Short undergraduate course taught at University of Pennsylvania on computational and theoretical neuroscience. Provides an introduction to programming in MATLAB, single-neuron models, ion channel models, basic neural networks, and neural decoding.

Finchscope ⭐ 34

Single photon tools for Neuroscience

The Batch Electroencephalography Automated Processing Platform (BEAPP)

Brain Mri Age Classification Using Deep Learning ⭐ 32

MATLAB example using deep learning to classify chronological age from brain MRI images

Neuro_data_science ⭐ 31

An open course in neural data science

Stringer Pachitariu Et Al 2018a ⭐ 31

Recordings of 10k neurons during spontaneous behaviors

Please use the new version of LiFE: www.github.com/brain-life/encode

Modelingneuraldynamics ⭐ 28

An Introduction to Modeling Neuronal Dynamics - Borgers in python, Single Neuron Models, Mathematical Modeling, Computational Neuroscience, Hodgkin-Huxley Equations, Differential Equations, Brain Rhythms, Synchronization, Dynamics

Neurorobot ⭐ 24

A neurorobot is a robot controlled by a computer simulation of a biological brain. At Backyard Brains we use neurorobots to teach neuroscience in schools.

BRAPH 2.0 is a comprehensive software package for the analysis and visualization of brain connectivity data, offering flexible customization, rich visualization capabilities, and a platform for collaboration in neuroscience research.

MATLAB/Octave GIfTI Library

Matlab_daqmx_examples ⭐ 23

DAQmx Examples using MATLAB

Factorial Mass Univariate ERP Toolbox (FMUT)

Python For Neuroscience ⭐ 23

A workshop for teaching python to neuroscientists with some previous programming experience.

An easy to use decoding toolbox for Matlab users.

Neural Spike Train Analysis Toolbox for Matlab

Abnormal Eeg Signal Classification Using Cnns ⭐ 20

This example shows how to build and train a convolutional neural network (CNN) from scratch to perform a classification task with an EEG dataset.

Implementing a RL algorithm based upon a partially observable Markov decision process.

Bdtoolkit ⭐ 19

The Brain Dynamics Toolbox

Neuroscience Information Theory Toolbox ⭐ 18

A MATLAB toolbox for performing information theory analyses of neuroscience data

Crabsort ⭐ 17

🦀🦀🦀 Sort spikes from extra-cellular recordings using neural networks. Fully automated.

Stitchit ⭐ 16

Stitching of large tiled datasets

Accusleep ⭐ 15

Automatically score rodent sleep using EEG and EMG recordings

Braintime ⭐ 14

Brain Time Toolbox: Warp electrophysiological data from clock time to brain time and analyze the dynamic neural patterns of cognitive processes.

HNCcorr algorithm for neuron identification in calcium imaging datasets.

Prioritizedreplay ⭐ 13

Code accompanying the paper: Mattar, M. G., & Daw, N. D. (2018). Prioritized memory access explains planning and hippocampal replay. bioRxiv, 225664.

Sourcemesh ⭐ 13

A multipurpose matlab-based MEG/EEG overlay & network plotter

Workshop Nyu 2019 ⭐ 12

Introductory workshop to modeling and model fitting in cognitive and computational neuroscience

Bci_learning ⭐ 11

Codepack accompanying "Learning by neural reassociation," Nature Neuroscience, 2018.

Visualstimulustoolbox ⭐ 11

A lightweight Matlab toolbox for generating, storing, and plotting visual stimuli related to vision and neuroscience research such as sinusoidal gratings, plaids, random dot fields, and noise.

Slice_display ⭐ 11

Slice Display is a MATLAB toolbox for visualizing fMRI data. It can make dual-coded images (simultaneous display of contrast estimate and unthreshold t-statistic maps) that show more and hide less.

Dynamic Spectrotemporal Receptive Field (dSTRF) Analysis Toolbox

Conn_tools ⭐ 11

Some tools for the extraction and plot of second-level ROI-to-ROI results from CONN Toolbox

Neuroscience ⭐ 11

Naive journal of computer engineering student who is trying to know more about brain science.

Mice Ultrasonic Profile ExTractor

Workshop Bristol 2019 ⭐ 10

Introductory workshop to modeling and model fitting in psychophysics and neuroscience

Predictingpersonalityfromeeg ⭐ 10

Predicting personality from the resting state EEG

Gx_tes_eeg_physio_behavior ⭐ 10

Supporting code for the GX Dataset

Eeg_to_erp_pipeline_stats_r ⭐ 9

General pipeline used for analyzing EEG data where Raw EEG data gets transformed into ERPS and Stats are done in R (Mixed effects models)

Bossdevice Api Matlab ⭐ 8

sync2brain's bossdevice RESEARCH Application Programmable Interface (API) for MATLAB

Tjd Shared Code ⭐ 8

Neuroscience/electrophsyiology data analysis tools (mostly Matlab)

Braineigenmodes_legacy ⭐ 7

Code supporting 'Geometric constraints on human brain function'

Vhlab Toolbox Matlab ⭐ 7

General purpose Matlab toolbox for neuroscience research created by Van Hooser lab and collaborators

Nsgportal ⭐ 7

EEGLAB plugin for NSG

Spm Hospital Preproc ⭐ 7

A MATLAB toolbox for various preprocessing operations (registration, reslicing, denoising, segmentation, etc.) of neuroimaging data. Builds on the SPM12 software.

Dataanabook ⭐ 7

MatLab code for Srpinger book 'Advanced Data Analysis in Neuroscience'

An online repository of the TMSEEG toolbox

Understanding Morlet Wavelet ⭐ 6

Gannet is a free, open-source MATLAB-based software toolkit for analyzing edited 1H magnetic resonance spectroscopy (MRS) data.

Multialternativedecisions ⭐ 6

Code for Tajima et al. (2019). Optimal policy for multi-alternative decisions. Nature Neuroscience.

Bakingtray ⭐ 6

Serial-section automated anatomy extension for ScanImage

'minis' is a software for electrophysiological data analysis. It allows you to detect and analyse spontaneous postsynaptic potetnials/currents in whole-cell patch clamp recordings and to estimate the quantal size in the central synapse.

Versatile Electrode localization fRAmework

Ara_tools ⭐ 6

Analysis of mouse brain STP data with respect to the Allen Reference Atlas

Srinivas.gs_mtools ⭐ 5

A collection of small functions and MATLAB tools, some that I have written.

Nwaydecomp ⭐ 5

NWAYDECOMP is a MATLAB toolbox intended for N-way/multi-way decompositions of neuroscience data

Neuropixels Acquisition toolbox for Matlab

Driftdiffusion ⭐ 5

Drift Diffusion class for Matlab

Mcntoolbox ⭐ 5

The Mathematical Cognitive Neuroscience Toolbox (mcntoolbox). Code associated with the publication "How attention influences perceptual decision making: Single-trial EEG correlates of drift-diffusion model parameters."

Neurotheory Seminar 2020 ⭐ 5

Seminar on Advanced Topics in Theoretical Neuroscience - Columbia University 2020

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