Awesome Open Source
Search
Programming Languages
Languages
All Categories
Categories
About
Search results for bioinformatics snps
bioinformatics
x
snps
x
15 search results found
Snippy
⭐
408
✂️ ⚡ Rapid haploid variant calling and core genome alignment
Pygeno
⭐
242
Personalized Genomics and Proteomics. Main diet: Ensembl, side dishes: SNPs
Strelka
⭐
204
Strelka2 germline and somatic small variant caller
Lineage
⭐
114
tools for genetic genealogy and the analysis of consumer DNA test results
Snprelate
⭐
90
R package: parallel computing toolset for relatedness and principal component analysis of SNP data (Development version only)
Snps
⭐
82
tools for reading, writing, merging, and remapping SNPs
Arv
⭐
75
A fast 23andMe DNA parser and inferrer for Python
Dna Traits
⭐
64
A fast 23andMe genome text file parser, now superseded by arv
Seqarray
⭐
41
Data management of large-scale whole-genome sequence variant calls (Development version only)
Geneticvariation.jl
⭐
33
Datastructures and algorithms for working with genetic variation
16gt
⭐
26
Simultaneous detection of SNPs and Indels using a 16-genotype probabilistic model
Hibag
⭐
23
R package – HLA Genotype Imputation with Attribute Bagging (development version only)
Gssplayground
⭐
21
Lightweight single-html-file-based Genome Segments playground for Visualize genome features cluster(gene arrow map or other features), add synteny among genome fragments or add crosslink among features, add short(PE/MP)/long reads(pacbio or nanopore) mapping or snpindel in vcf(not support complex sv yet), support all CIGAR of sam alignment, directly modify almost all features in Chrome by click the feature
Proxysnps
⭐
21
🔖 Get SNP proxies from the 1000 Genomes Project.
Phat
⭐
17
Pathogen-Host Analysis Tool - A modern Next-Generation Sequencing (NGS) analysis platform
Snpbinner
⭐
17
SNPbinner is a utility for the generation of genotype crossover points and binmaps based on SNP data across recombinant inbred lines.
Mutation Simulator
⭐
16
A tool for simulating random mutations in any genome
Vargeno
⭐
15
Towards fast and accurate SNP genotyping from whole genome sequencing data for bedside diagnostics.
Psdm
⭐
10
Compute a pairwise SNP distance matrix from one or two alignment(s)
Bioinformatics
⭐
10
A suite of bioinformatics data processing and analysis pipelines, software, and training resources for common DNA and RNA sequence analysis methods.
Vizsnp St
⭐
5
Visualizing the effect of SNPs on protein structure using iCn3D
Rdna Nexus
⭐
5
Functions to analyse UK Biobank genetic data directly from DNA Nexus' RStudio Workbench
Related Searches
Python Bioinformatics (1,509)
Bioinformatics Genomics (546)
R Bioinformatics (490)
Genome Bioinformatics (436)
Pipeline Bioinformatics (283)
Bioinformatics Protein (281)
C Plus Plus Bioinformatics (267)
Bioinformatics Sequencing (239)
Bioinformatics Fasta (223)
Bioinformatics Dna (204)
1-15 of 15 search results
Privacy
|
About
|
Terms
|
Follow Us On Twitter
Copyright 2018-2024 Awesome Open Source. All rights reserved.