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The Top 6 Cancer Genomics Somatic Mutations Open Source Projects

Open source projects categorized as Cancer Genomics Somatic Mutations
Categories > Science > Cancer Genomics
Categories > Somatic Mutations
Lancet ⭐ 145
Microassembly based somatic variant caller for NGS data
most recent commit 2 years ago
Palimpsest ⭐ 56
An R package for studying mutational signatures and structural variant signatures along clonal evolution in cancer.
most recent commit 3 years ago
Detin ⭐ 48
DeTiN is designed to measure tumor-in-normal contamination and improve somatic variant detection sensitivity when using a contaminated matched control.
most recent commit 2 years ago
Somaticfreq ⭐ 8
knowledge-based genotyping of cancer hotspots from the tumor BAM files
most recent commit 2 years ago
Camutqc ⭐ 6
An R package for mutation quality control of cancer genomic sequening dataset
most recent commit 4 months ago
Svparser ⭐ 6
Explore and filter structural variant calls from Lumpy and Delly VCF files
most recent commit 3 years ago
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