Eagle
| Project Name | Stars | Downloads | Repos Using This | Packages Using This | Most Recent Commit | Total Releases | Latest Release | Open Issues | License | Language |
|---|---|---|---|---|---|---|---|---|---|---|
| Sigprofilersinglesample | 22 | a year ago | 1 | Python | ||||||
| SigProfilerSingleSample allows attributing a known set of mutational signatures to an individual sample. The tool identifies the activity of each signature in the sample and assigns the probability for each signature to cause a specific mutation type in the sample. The tool makes use of SigProfilerMatrixGenerator and SigProfilerPlotting. | ||||||||||
| Eagle | 15 | a year ago | gpl-3.0 | C | ||||||
| Phenopredict21 | 15 | 8 years ago | Python | |||||||
| Command line tool to predict phenotype from VCF (gets models from pheno-server-21) | ||||||||||
| Genome_painter | 15 | 2 years ago | gpl-3.0 | C++ | ||||||
| Paint genomes with taxa-specific k-mer probabilities | ||||||||||
| Bolotie | 11 | 9 months ago | 4 | C++ | ||||||
| SARS-CoV-2: detecting recombinations in viruses using large data sets with high sequence similarity | ||||||||||
| Recurrentmutationstats | 8 | 8 years ago | 1 | R | ||||||
| This contains code for statistical analysis of recurrent mutations in whole genome sequencing data. | ||||||||||
| Predrad | 6 | 8 years ago | 1 | gpl-2.0 | R | |||||
| Scripts | ||||||||||
| Gaeseq | 5 | 4 years ago | C++ | |||||||
| GAEseq: A Graph Auto-Encoder for Haplotype Assembly and Viral Quasispecies Reconstruction | ||||||||||
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