Drake Alternatives
An R-focused pipeline toolkit for reproducibility and high-performance computing
| Project Name | Stars | Downloads | Repos Using This | Packages Using This | Most Recent Commit | Total Releases | Latest Release | Open Issues | License | Language |
|---|---|---|---|---|---|---|---|---|---|---|
| Drake | 1,329 | 15 | 1 | 5 months ago | 47 | November 06, 2023 | gpl-3.0 | R | ||
| An R-focused pipeline toolkit for reproducibility and high-performance computing | ||||||||||
| Targets | 887 | 3 months ago | other | R | ||||||
| Function-oriented Make-like declarative workflows for R | ||||||||||
| Open Solution Home Credit | 449 | 2 years ago | 1 | mit | Python | |||||
| Open solution to the Home Credit Default Risk challenge :house_with_garden: | ||||||||||
| Dna Seq Gatk Variant Calling | 138 | 3 years ago | 10 | mit | Python | |||||
| This Snakemake pipeline implements the GATK best-practices workflow | ||||||||||
| Steppy | 134 | 5 | 6 years ago | 16 | November 23, 2018 | 16 | mit | Python | ||
| Lightweight, Python library for fast and reproducible experimentation :microscope: | ||||||||||
| Tarchetypes | 108 | 8 months ago | other | R | ||||||
| Archetypes for targets and pipelines | ||||||||||
| Vistrails | 92 | 7 years ago | 181 | bsd-3-clause | Python | |||||
| VisTrails is an open-source data analysis and visualization tool. It provides a comprehensive provenance infrastructure that maintains detailed history information about the steps followed and data derived in the course of an exploratory task: VisTrails maintains provenance of data products, of the computational processes that derive these products and their executions. | ||||||||||
| Targets Tutorial | 90 | 10 months ago | other | R | ||||||
| Short course on the targets R package | ||||||||||
| Targets Shiny | 60 | a year ago | other | R | ||||||
| Example Shiny app containing a targets pipeline. | ||||||||||
| Drake Examples | 58 | 3 years ago | 2 | R | ||||||
| Example workflows for the drake R package | ||||||||||
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