Macse_v2_pipelines
This repository provides source code for several pipelines dedicated to the alignment of nucleotide coding sequences that are based on MACSE. These pipelines are mostly bash scripts encapsulated within singularity containers and sometimes combined in nextflow workflows.
| Project Name | Stars | Downloads | Repos Using This | Packages Using This | Most Recent Commit | Total Releases | Latest Release | Open Issues | License | Language |
|---|---|---|---|---|---|---|---|---|---|---|
| Phylotar | 24 | 10 months ago | 1 | July 31, 2018 | 8 | other | R | |||
| An automated pipeline for retrieving orthologous DNA sequences from GenBank in R | ||||||||||
| Macse_v2_pipelines | 21 | 9 months ago | 1 | Shell | ||||||
| This repository provides source code for several pipelines dedicated to the alignment of nucleotide coding sequences that are based on MACSE. These pipelines are mostly bash scripts encapsulated within singularity containers and sometimes combined in nextflow workflows. | ||||||||||
| Rnaseq Pipeline | 18 | 4 months ago | 39 | unlicense | Python | |||||
| RNA-seq pipeline for raw sequence alignment and transcript/gene quantification. | ||||||||||
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Sequence Alignment