Project Name | Stars | Downloads | Repos Using This | Packages Using This | Most Recent Commit | Total Releases | Latest Release | Open Issues | License | Language |
---|---|---|---|---|---|---|---|---|---|---|
Chrom3d | 40 | a year ago | 22 | mit | C++ | |||||
Irep | 37 | 4 years ago | 17 | February 14, 2018 | 11 | mit | Python | |||
scripts for estimating bacteria replication rates based on population genome copy number variation | ||||||||||
Mcorr | 19 | 1 | 2 years ago | 1 | January 07, 2022 | 4 | Go | |||
Inferring bacterial recombination rates from large-scale sequencing datasets. | ||||||||||
Linked Selection | 19 | 7 years ago | R | |||||||
Argon | 15 | 4 years ago | 1 | apache-2.0 | Java | |||||
Fast, whole-genome simulation of the discrete time Wright-Fisher process | ||||||||||
Bs3 | 14 | 5 years ago | 29 | Python | ||||||
BS-Seeker3: An Ultra-fast, Versatile Pipeline for Mapping Bisulfite-treated Reads. | ||||||||||
Micro_ga | 11 | 12 years ago | Ruby | |||||||
Genetic Algorithm in Ruby in < 30 lines | ||||||||||
Grid | 10 | 4 years ago | 4 | Shell | ||||||
Growth Rate Index (GRiD) measures bacterial growth rate from reference genomes (including draft quality genomes) and metagenomic bins at ultra-low sequencing coverage (> 0.2x). | ||||||||||
Mers_recombination | 6 | 9 years ago | TeX | |||||||
Does MERS-CoV recombine? |