Project Name | Stars | Downloads | Repos Using This | Packages Using This | Most Recent Commit | Total Releases | Latest Release | Open Issues | License | Language |
---|---|---|---|---|---|---|---|---|---|---|
Sequenceserver | 259 | 1 | 3 months ago | 68 | October 05, 2023 | 91 | agpl-3.0 | JavaScript | ||
Intuitive graphical web interface for running BLAST bioinformatics tool (i.e. have your own custom NCBI BLAST site!) | ||||||||||
Tools Microbiome Analysis | 95 | a year ago | CSS | |||||||
A list of R environment based tools for microbiome data exploration, statistical analysis and visualization | ||||||||||
Wally | 86 | 3 months ago | 1 | bsd-3-clause | C++ | |||||
Wally: Visualization of aligned sequencing reads and contigs | ||||||||||
Fastv | 56 | 4 years ago | 1 | mit | C++ | |||||
An ultra-fast tool for identification of SARS-CoV-2 and other microbes from sequencing data. This tool can be used to detect viral infectious diseases, like COVID-19. | ||||||||||
Cnview | 50 | 6 years ago | 3 | mit | R | |||||
Visualization and annotation of CNVs from population-scale whole-genome sequencing data | ||||||||||
Fluentdna | 43 | 3 years ago | 3 | January 13, 2020 | 30 | JavaScript | ||||
FluentDNA allows you to browse sequence data of any size using a zooming visualization similar to Google Maps. You can use FluentDNA as a standalone program or as a python module for your own bioinformatics projects. | ||||||||||
Dokdo | 30 | a year ago | 4 | mit | Python | |||||
A Python package for microbiome sequencing analysis with QIIME 2 | ||||||||||
Angsd Wrapper | 13 | 4 years ago | 5 | mit | Shell | |||||
Utilities for analyzing next generation sequencing data. | ||||||||||
Chronqc | 13 | 5 years ago | 3 | mit | HTML | |||||
Manuscript describing ChronQC is now available online in Bioinformatics | ||||||||||
Nasqar | 10 | 4 years ago | 1 | HTML | ||||||
NASQAR: A web-based platform for High-throughput sequencing data analysis and visualization |