| pachterlab/gget |
1,121 |
|
0 |
2 |
about 1 month ago |
59 |
November 16, 2023 |
11 |
bsd-2-clause |
Python |
| 🧬 gget enables efficient querying of genomic reference databases |
| cBioPortal/cbioportal |
535 |
|
0 |
0 |
over 2 years ago |
0 |
|
495 |
agpl-3.0 |
Java |
| cBioPortal for Cancer Genomics |
| priyank-purohit/PostGUI |
335 |
|
0 |
0 |
over 4 years ago |
0 |
|
5 |
gpl-3.0 |
JavaScript |
| A React web application to query and share any PostgreSQL database. |
| sanger-pathogens/Artemis |
191 |
|
0 |
0 |
about 3 years ago |
0 |
|
25 |
other |
Java |
| Artemis is a free genome viewer and annotation tool that allows visualization of sequence features and the results of analyses within the context of the sequence, and its six-frame translation |
| pirovc/genome_updater |
123 |
|
0 |
0 |
over 2 years ago |
0 |
|
3 |
mit |
Shell |
| Bash script to download/update snapshots of files from NCBI genomes repository (refseq/genbank) with track of changes and without redundancy |
| phac-nml/staramr |
75 |
|
0 |
0 |
almost 3 years ago |
18 |
August 24, 2023 |
6 |
apache-2.0 |
Python |
| Scans genome contigs against the ResFinder, PlasmidFinder, and PointFinder databases. |
| refresh-bio/kmer-db |
68 |
|
0 |
0 |
about 3 years ago |
0 |
|
4 |
gpl-3.0 |
C++ |
| Kmer-db is a fast and memory-efficient tool for large-scale k-mer analyses (indexing, querying, estimating evolutionary relationships, etc.). |
| materialsproject/pymatgen-db |
46 |
|
6 |
3 |
over 2 years ago |
54 |
May 28, 2021 |
2 |
mit |
Python |
| Pymatgen-db provides an addon to the Python Materials Genomics (pymatgen) library (https://pypi.python.org/pypi/pymatgen) that allows the creation of Materials Project-style databases for management of materials data. |
| enormandeau/barque |
25 |
|
0 |
0 |
over 2 years ago |
0 |
|
1 |
|
Python |
| Environmental DNA metabarcoding taxonomic identification |
| iquasere/reCOGnizer |
24 |
|
0 |
0 |
over 2 years ago |
0 |
|
0 |
bsd-3-clause |
HTML |
| A tool for domain based annotation with databases from the Conserved Domains Database |
