Canu Alternatives

A single molecule sequence assembler for genomes large and small.
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Alternatives To marbl/canu
Project Name Stars Downloads Repos Using This Packages Using This Most Recent Commit Total Releases Latest Release Open Issues License Language
marbl/canu 613 0 0 over 2 years ago 0 20 C++
A single molecule sequence assembler for genomes large and small.
bcgsc/tigmint 53 0 0 almost 3 years ago 1 August 30, 2018 1 gpl-3.0 Python
⛓ Correct misassemblies using linked AND long reads
richarddurbin/hash10x 14 0 0 over 6 years ago 0 1 apache-2.0 C
a toolset for efficient analysis of 10X Genomics linked read data sets, in particular for de novo assembly
BilkentCompGen/valor 14 0 0 over 5 years ago 0 3 bsd-3-clause C
variation discovery using long range information in linked-reads
bcgsc/chromeqc 13 0 0 about 7 years ago 0 1 mit HTML
ChromeQC: Summarize sequencing library quality of 10x Genomics Chromium linked reads
kstatebioinfo/Irys-scaffolding 10 0 0 about 11 years ago 0 3 mit Perl
scripts to parse IrysView output
fanglab/SMRTER 6 0 0 over 7 years ago 0 3 R
Single Molecule Real Time sequencing Epigenetic Refinement
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