H3agwas
| Project Name | Stars | Downloads | Repos Using This | Packages Using This | Most Recent Commit | Total Releases | Latest Release | Open Issues | License | Language |
|---|---|---|---|---|---|---|---|---|---|---|
| Somaticseq | 185 | 6 months ago | 1 | May 04, 2022 | 5 | bsd-2-clause | Python | |||
| An ensemble approach to accurately detect somatic mutations using SomaticSeq | ||||||||||
| Gcp Variant Transforms | 114 | 2 years ago | 110 | apache-2.0 | Python | |||||
| GCP Variant Transforms | ||||||||||
| Neopredpipe | 93 | 7 months ago | 5 | lgpl-3.0 | Python | |||||
| Neoantigens prediction pipeline for multi- or single-region vcf files using ANNOVAR and netMHCpan. | ||||||||||
| H3agwas | 89 | 5 months ago | 11 | other | Nextflow | |||||
| GWAS Pipeline for H3Africa | ||||||||||
| Pipeline Structural Variation | 87 | 2 years ago | 19 | other | Python | |||||
| Pipeline for calling structural variations in whole genomes sequencing Oxford Nanopore data | ||||||||||
| Selectiontools | 53 | a year ago | 16 | mit | Python | |||||
| Pipeline to take VCF through to Selection Analysis. | ||||||||||
| Admixturepipeline | 46 | 5 months ago | gpl-3.0 | Python | ||||||
| A pipeline that accepts a VCF file to run through Admixture | ||||||||||
| Germline Dna | 23 | a year ago | 2 | mit | wdl | |||||
| A BioWDL variantcalling pipeline for germline DNA data. Starting with FASTQ files to produce VCF files. Category:Multi-Sample | ||||||||||
| Allbiotc2 | 22 | 10 years ago | 8 | Python | ||||||
| Benchmark pipeline for Structural Variation analyses, funded by the ALLBio. | ||||||||||
| Sv Pipeline | 21 | 4 years ago | 8 | wdl | ||||||
| Pipeline for structural variation detection in cohorts | ||||||||||
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Vcf