Checkm
Assess the quality of microbial genomes recovered from isolates, single cells, and metagenomes
| Project Name | Stars | Downloads | Repos Using This | Packages Using This | Most Recent Commit | Total Releases | Latest Release | Open Issues | License | Language |
|---|---|---|---|---|---|---|---|---|---|---|
| Pygenometracks | 654 | 10 months ago | 33 | gpl-3.0 | Python | |||||
| python module to plot beautiful and highly customizable genome browser tracks | ||||||||||
| Samplot | 458 | 5 months ago | 3 | October 11, 2020 | 42 | mit | Python | |||
| Plot structural variant signals from many BAMs and CRAMs | ||||||||||
| Karyoploter | 278 | 4 months ago | 51 | R | ||||||
| karyoploteR - An R/Bioconductor package to plot arbitrary data along the genome | ||||||||||
| Checkm | 235 | 2 years ago | 9 | gpl-3.0 | Python | |||||
| Assess the quality of microbial genomes recovered from isolates, single cells, and metagenomes | ||||||||||
| Merqury | 234 | 4 months ago | 16 | other | Shell | |||||
| k-mer based assembly evaluation | ||||||||||
| Ngs_learning | 131 | 4 years ago | ||||||||
| 生物信息学交流资料 | ||||||||||
| Dgenies | 85 | 5 months ago | 62 | gpl-3.0 | JavaScript | |||||
| Dotplot large Genomes in an Interactive, Efficient and Simple way | ||||||||||
| Mummer2circos | 79 | 5 months ago | 7 | mit | Python | |||||
| Circular bacterial genome plots based on BLAST or NUCMER/PROMER alignments | ||||||||||
| Jupiterplot | 54 | a year ago | 11 | gpl-3.0 | Perl | |||||
| A Circos-based tool to visualize genome assembly consistency | ||||||||||
| Dot | 43 | 4 years ago | 5 | mit | JavaScript | |||||
| Dot: An interactive dot plot viewer for comparative genomics | ||||||||||
Alternatives To CheckmSelect To Compare
Alternative Project Comparisons
Popular Genome Projects
Popular Plot Projects
Popular Science Categories
Get A Weekly Email With Trending Projects For These Categories
No Spam. Unsubscribe easily at any time.
Python
Plot
Genome