Sh Assembly
K-mer counting with low memory consumption enables de novo assembly of 106x human sequence data in 2.7 hours
| Project Name | Stars | Downloads | Repos Using This | Packages Using This | Most Recent Commit | Total Releases | Latest Release | Open Issues | License | Language |
|---|---|---|---|---|---|---|---|---|---|---|
| Astarix | 54 | 2 years ago | 2 | mpl-2.0 | C++ | |||||
| AStarix: Fast and Optimal Sequence-to-Graph Aligner | ||||||||||
| Graph Sequencer | 18 |  | 7 | 15 | 4 years ago | 2 | December 07, 2017 | 6 | mit | JavaScript |
| Sort items in a graph using a topological sort while resolving cycles with priority groups | ||||||||||
| Npg_seq_pipeline | 9 | 3 months ago | 32 | Perl | ||||||
| Processing and analysis of data coming from Illumina sequencing machines | ||||||||||
| Chopstitch | 9 | 5 years ago | 2 | other | C++ | |||||
| Finding putative exons and constructing splicegraphs using Trans-ABySS contigs | ||||||||||
| Abyss Scaffold Paper | 5 | 5 years ago | HTML | |||||||
| Scaffolding a genome sequence assembly using ABySS | ||||||||||
| Sh Assembly | 5 | 3 years ago | 1 | other | C++ | |||||
| K-mer counting with low memory consumption enables de novo assembly of 106x human sequence data in 2.7 hours | ||||||||||
| Graph Iss | 5 | 4 years ago | apache-2.0 | Jupyter Notebook | ||||||
| Graph-based Decoding for In Situ Sequencing | ||||||||||
| Gyper | 5 | 8 years ago | 1 | bsd-2-clause | C++ | |||||
| A graph-based genotyper for aligned DNA sequencing data | ||||||||||
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