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Search results for whole genome sequencing
whole-genome-sequencing
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30 search results found
Sarek
⭐
299
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
Ilus
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89
A handy variant calling pipeline generator for whole-genome sequencing (WGS) and whole exom sequencing data (WES) analysis. 一个简易且全面的 WGS/WES 分析流程生成器.
Pipeline Structural Variation
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87
Pipeline for calling structural variations in whole genomes sequencing Oxford Nanopore data
Wholegenomesequencing
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86
Whole Genome Sequencing analysis, WGS analysis
Staar
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81
An R package for performing STAAR procedure in whole-genome sequencing studies
Strling
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55
Detect novel (and reference) STR expansions from short-read data
Vcfdist
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48
vcfdist: Accurately benchmarking phased variant calls
Staarpipeline
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45
An R package for performing association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using STAARpipeline
Pipeliner
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44
An open-source and scalable solution to NGS analysis powered by the NIH's Biowulf cluster.
Plasmidid
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22
PlasmidID is a mapping-based, assembly-assisted plasmid identification tool that analyzes and gives graphic solution for plasmid identification.
Cfdnapro
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20
cfDNAPro specializes in standardized and robust cfDNA fragmentomic analysis
Alignment Nf
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18
Whole Exome/Whole Genome Sequencing alignment pipeline
Metastaar
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18
An R package for performing MetaSTAAR procedure in whole-genome sequencing studies
Bactpipe
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17
BACTpipe: An assembly and annotation pipeline for bacterial genomics
Mity
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16
mity: A highly sensitive mitochondrial variant analysis pipeline for whole genome sequencing data
Gambit
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16
A methodology to rapidly leverage whole genome sequencing of bacterial isolates for clinical identification.
Vsnp
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13
vSNP -- validate SNPs
Staarpipeline Tutorial
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12
The tutorial for performing association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using FAVORannotator, STAARpipeline and STAARpipelineSummary
Genome Seek
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12
Clinical Whole Genome Sequencing Pipeline
Seq Pipeline
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12
Workspace for data science projects and NGS pipelines. Contains RStudio, Jupyter Notebook, VSCode and file manager. Can connect to Tailscale network to bypass firewalls.
Jarvis
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9
JARVIS: a comprehensive deep learning framework to prioritise non-coding variants in whole genomes
Captus
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8
Assembly of Phylogenomic Datasets from High-Throughput Sequencing data
Staarpipelinesummary
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7
An R package for summarizing and visualizing association analysis results of whole-genome/whole-exome sequencing (WGS/WES) studies generated by STAARpipeline
Mgp1000
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7
Nextflow bioinformatics pipeline for large-scale analysis of Multiple Myeloma genomes
Bactprep
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6
Flexible workflow designed for bacterial WGS analyses (annotation, core/pan-genome reconstruction, phylogeny)
Pp
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6
Smart and Accurate Polishing of Phase Haplotypes Integrating Read Enhancements (SAPPHIRE)
Raids
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5
Accurate and robust inference of genetic ancestry from cancer-derived molecular data across genomic platforms
As_analysis
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5
A complete Snakemake pipeline for detecting allele specific expression
Arpeggio
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5
A SnakeMake workflow to analyse whole genome bisulfite sequencing data from allopolyploids.
Gremlin
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5
GREMLIN: Genomic REarrangements by Machine Learning-based INspection
Related Searches
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Pipeline Whole Genome Sequencing (10)
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Whole Genome Sequencing Functional Annotation (9)
Variants Whole Genome Sequencing (6)
Vcf Whole Genome Sequencing (5)
Ngs Whole Genome Sequencing (5)
1-30 of 30 search results
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