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Search results for pipeline whole genome sequencing

whole-genome-sequencing x

9 search results found

Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing

A handy variant calling pipeline generator for whole-genome sequencing (WGS) and whole exom sequencing data (WES) analysis. 一个简易且全面的 WGS/WES 分析流程生成器.

Pipeline Structural Variation ⭐ 87

Pipeline for calling structural variations in whole genomes sequencing Oxford Nanopore data

Pipeliner ⭐ 44

An open-source and scalable solution to NGS analysis powered by the NIH's Biowulf cluster.

Bactpipe ⭐ 17

BACTpipe: An assembly and annotation pipeline for bacterial genomics

vSNP -- validate SNPs

Genome Seek ⭐ 12

Clinical Whole Genome Sequencing Pipeline

Seq Pipeline ⭐ 12

Workspace for data science projects and NGS pipelines. Contains RStudio, Jupyter Notebook, VSCode and file manager. Can connect to Tailscale network to bypass firewalls.

Nextflow bioinformatics pipeline for large-scale analysis of Multiple Myeloma genomes

As_analysis ⭐ 5

A complete Snakemake pipeline for detecting allele specific expression

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