Strling
Detect novel (and reference) STR expansions from short-read data
| Project Name | Stars | Downloads | Repos Using This | Packages Using This | Most Recent Commit | Total Releases | Latest Release | Open Issues | License | Language |
|---|---|---|---|---|---|---|---|---|---|---|
| Braker | 293 | 3 months ago | 77 | other | Perl | |||||
| BRAKER is a pipeline for fully automated prediction of protein coding gene structures with GeneMark-ES/ET/EP/ETP and AUGUSTUS in novel eukaryotic genomes | ||||||||||
| Centrifuge | 215 | 7 months ago | 116 | gpl-3.0 | C++ | |||||
| Classifier for metagenomic sequences | ||||||||||
| Mirdeep2 | 120 | 5 months ago | 2 | gpl-3.0 | Perl | |||||
| Discovering known and novel miRNAs from small RNA sequencing data | ||||||||||
| Strling | 55 | 8 months ago | 19 | mit | Nim | |||||
| Detect novel (and reference) STR expansions from short-read data | ||||||||||
| Mumandco | 49 | 10 months ago | 10 | gpl-3.0 | Shell | |||||
| MUM&Co is a simple bash script that uses Whole Genome Alignment information provided by MUMmer (only v4) to detect Structural Variation | ||||||||||
| Decrippter | 6 | 2 years ago | 1 | agpl-3.0 | HTML | |||||
| Genome mining tool for novel RiPP BGCs | ||||||||||
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