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Search results for structural variation long reads

structural-variation x

7 search results found

NGMLR is a long-read mapper designed to align PacBio or Oxford Nanopore (standard and ultra-long) to a reference genome with a focus on reads that span structural variations

Pipeline Structural Variation ⭐ 87

Pipeline for calling structural variations in whole genomes sequencing Oxford Nanopore data

Toolkit for calling structural variants using short or long reads

Princess ⭐ 74

Swipe your Structural Variants called on long (ONT/PacBio) reads with short exact (Illumina) reads.

Svcollector ⭐ 17

Method to optimally select samples for validation and resequencing

Project Diploid Assembly ⭐ 8

Pipeline code for creating a fully haplotype-resolved assembly from a combination of PacBio/ONT long reads and Illumina Strand-seq data

A scalable variant calling and benchmarking framework supporting both short and long reads.

Svjedi Graph ⭐ 5

SV genotyper for long reads with a variation graph

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