Awesome Open Source
Search
Programming Languages
Languages
All Categories
Categories
About
Search results for variants structural variation
structural-variation
x
variants
x
2 search results found
Manta
⭐
333
Structural variant and indel caller for mapped sequencing data
Svaba
⭐
211
Structural variation and indel detection by local assembly
Smoove
⭐
173
structural variant calling and genotyping with existing tools, but, smoothly.
Pipeline Structural Variation
⭐
87
Pipeline for calling structural variations in whole genomes sequencing Oxford Nanopore data
Svtools
⭐
79
Tools for processing and analyzing structural variants.
Dysgu
⭐
75
Toolkit for calling structural variants using short or long reads
Princess
⭐
74
Duphold
⭐
73
don't get DUP'ed or DEL'ed by your putative SVs.
Lorikeet
⭐
61
Strain resolver for metagenomics
Bayestyper
⭐
52
A method for variant graph genotyping based on exact alignment of k-mers
Clinsv
⭐
51
Robust detection of clinically relevant structural and copy number variation from whole genome sequencing data
Sviper
⭐
28
Swipe your Structural Variants called on long (ONT/PacBio) reads with short exact (Illumina) reads.
Witty.er
⭐
26
What is true, thank you, ernestly. A large variant benchmarking tool analogous to hap.py for small variants.
Svcollector
⭐
17
Method to optimally select samples for validation and resequencing
Icallsv
⭐
16
A Framework to call Structural Variants from NGS based datasets
Svaha2
⭐
14
Linear-time, low-memory construction of variation graphs
Nrex
⭐
8
nRex: Germline and somatic single-nucleotide, short indel and structural variant calling
Vc
⭐
8
A tutorial on structural variant calling for short read sequencing data
Varathon
⭐
7
A scalable variant calling and benchmarking framework supporting both short and long reads.
Svparser
⭐
6
Explore and filter structural variant calls from Lumpy and Delly VCF files
Sv Pop
⭐
6
Upscaling SV detection to a multi-population level.
Related Searches
Python Variants (976)
Javascript Variants (594)
C Plus Plus Variants (444)
Variants Vcf (408)
Variants Genome (313)
R Variants (233)
Shell Variants (228)
Pipeline Variants (214)
Variants Sequencing (157)
Variants Bioinformatics (131)
1-2 of 2 search results
Privacy
|
About
|
Terms
|
Follow Us On Twitter
Copyright 2018-2024 Awesome Open Source. All rights reserved.