Project Name	Stars	Packages Using This	Most Recent Commit	Total Releases	Latest Release	Open Issues	License	Language
Vg	1,022		4 months ago			760	other	C++
tools for working with genome variation graphs
Hifiasm	443		4 months ago			324	mit	C++
Hifiasm: a haplotype-resolved assembler for accurate Hifi reads
Minigraph	367		5 months ago	1	June 21, 2023	44	mit	C
Proof-of-concept seq-to-graph mapper and graph generator
Canvasxpress	282	4	4 months ago	43	November 08, 2023	7		R
CanvasXpress: A JavaScript Library for Data Analytics with Full Audit Trail Capabilities.
Gfatools	181		7 months ago			17		C
Tools for manipulating sequence graphs in the GFA and rGFA formats
Fermi Lite	67		a year ago			12	mit	C
Standalone C library for assembling Illumina short reads in small regions
Gatb Core	61		6 months ago			12		C++
Core library of the Genome Analysis Toolbox with de-Bruijn graph
Raptor	50		4 years ago				bsd-3-clause-clear	Perl
Graph-based mapping of long sequences, noisy or HiFi.
Twopaco	39		2 years ago			9	other	C++
A fast constructor of the compressed de Bruijn graph from many genomes
Libbdsg	29		6 months ago	3	October 02, 2020	30	mit	C++
Optimized sequence graph implementations for graph genomics

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Vg ⭐ 1,022

tools for working with genome variation graphs

most recent commit 4 months ago

Hifiasm ⭐ 443

Hifiasm: a haplotype-resolved assembler for accurate Hifi reads

most recent commit 4 months ago

Minigraph ⭐ 367

Proof-of-concept seq-to-graph mapper and graph generator

total releases 1most recent commit 5 months ago

Canvasxpress ⭐ 282

CanvasXpress: A JavaScript Library for Data Analytics with Full Audit Trail Capabilities.

dependent packages 4total releases 43most recent commit 4 months ago

Gfatools ⭐ 181

Tools for manipulating sequence graphs in the GFA and rGFA formats

most recent commit 7 months ago

Fermi Lite ⭐ 67

Standalone C library for assembling Illumina short reads in small regions

most recent commit a year ago

Gatb Core ⭐ 61

Core library of the Genome Analysis Toolbox with de-Bruijn graph

most recent commit 6 months ago

Raptor ⭐ 50

Graph-based mapping of long sequences, noisy or HiFi.

most recent commit 4 years ago

Twopaco ⭐ 39

A fast constructor of the compressed de Bruijn graph from many genomes

most recent commit 2 years ago

Libbdsg ⭐ 29

Optimized sequence graph implementations for graph genomics

total releases 3most recent commit 6 months ago

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