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Search results for pipeline vcf
pipeline
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vcf
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31 search results found
Somaticseq
⭐
185
An ensemble approach to accurately detect somatic mutations using SomaticSeq
Gcp Variant Transforms
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114
GCP Variant Transforms
Neopredpipe
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93
Neoantigens prediction pipeline for multi- or single-region vcf files using ANNOVAR and netMHCpan.
H3agwas
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89
GWAS Pipeline for H3Africa
Pipeline Structural Variation
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87
Pipeline for calling structural variations in whole genomes sequencing Oxford Nanopore data
Selectiontools
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53
Pipeline to take VCF through to Selection Analysis.
Admixturepipeline
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46
A pipeline that accepts a VCF file to run through Admixture
Germline Dna
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23
A BioWDL variantcalling pipeline for germline DNA data. Starting with FASTQ files to produce VCF files. Category:Multi-Sample
Allbiotc2
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22
Benchmark pipeline for Structural Variation analyses, funded by the ALLBio.
Sv Pipeline
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21
Pipeline for structural variation detection in cohorts
Variant_catalogue_pipeline
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20
Variant catalogue pipeline
Rnaseq Nf
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20
RNAseq analysis pipeline
Smurf
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19
Haplotypo
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17
This is the Haplotypo repository
Hrdetect Pipeline
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15
Rmap
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15
Bacterial analysis Toolbox for profiling the Resistome of ESKAPE pathogens using WGS
Variants2neoantigen
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14
a neoantigen calling pipeline begins from variants record file (MAF)
Vsnp
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13
vSNP -- validate SNPs
Psap Pipeline
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12
Snpmatch
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9
A simple python library to identify the most likely strain from the population
Findsv
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9
Structural variant pipeline
Somaticwrapper
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8
Detect somatic variants from tumor and normal WGS/WXS data
Gatk For Microbes
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8
Analysis Driver
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8
Pipelines for Illumina HiSeqX demultiplexing, sequence QC and variant calling.
Mb Gatk Sge
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8
SGE scripts / pipeline for running GATK/VEP on a cluster
Tribes
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7
Finding cryptic relationships to boost disease gene detection
Sentieon Dnascope Ml
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7
Sentieon DNAscope + Machine Learning Model
Novel X
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7
Novel insertion detection with 10X reads
Cloudflow
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7
Cloudflow is a MapReduce and Spark pipeline framework to simplify the pipeline creation in biomedical research, especially in the field of Genetics.
Artic Tools
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5
a set of tools for viral amplicon schemes
Rgapeppipe
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5
Reference Guided Assembly Pepperell Lab Pipeline
Indel_correction_pipeline
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5
new falcon assemblies that have been quivered and Pilon polished still have heterozygote indel errors. This pipeline will correct most of them.
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1-31 of 31 search results
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