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Search results for ontology obofoundry
obofoundry
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ontology
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67 search results found
Humandiseaseontology
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315
Repository for the Human Disease Ontology.
Human Phenotype Ontology
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269
Ontology for the description of human clinical features
Robot
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240
ROBOT is an OBO Tool
Pronto
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212
A Python frontend to (Open Biomedical) Ontologies.
Mondo
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203
Mondo Disease Ontology
Ontology Development Kit
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202
Bootstrap an OBO Library ontology
Go Ontology
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200
Source ontology files for the Gene Ontology
Foodon
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162
The core repository for the FOODON food ontology project. This holds the key classes of the ontology; larger files and the results of text-mining projects will be stored in other repos.
Obofoundry.github.io
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140
Metadata and website for the Open Bio Ontologies Foundry Ontology Registry
Uberon
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126
An ontology of gross anatomy covering metazoa. Works in concert with https://github.com/obophenotype/cell-ontology
Cell Ontology
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126
An ontology of cell types
Envo
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121
A community-driven ontology for the representation of environments
Pheknowlator
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116
PheKnowLator: Heterogeneous Biomedical Knowledge Graphs and Benchmarks Constructed Under Alternative Semantic Models
Ontobio
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114
python library for working with ontologies and ontology associations
Ontology Access Kit
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89
Ontology Access Kit: A python library and command line application for working with ontologies
Obo Relations
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83
RO is an ontology of relations for use with biological ontologies
Obi
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68
The Ontology for Biomedical Investigations
Purl.obolibrary.org
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67
A system for managing OBO PURLs
Obographs
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58
Basic and Advanced OBO Graphs: specification and reference implementation
Pato
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56
PATO - the Phenotype And Trait Ontology
Iao
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54
information artifact ontology
Pyobo
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50
📛 A Python package for using ontologies, terminologies, and biomedical nomenclatures
Duo
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48
Ontology for consent codes and data use requirements
Evidenceontology
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41
Evidence & Conclusion Ontology development site: Use ISSUES to request terms. See WIKI for how to request terms. See README for how to cite ECO. Visit our website for more project info.
Maxo
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41
Medical action ontology
Dead_simple_owl_design_patterns
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40
A simple system for specifying OWL class design patterns for OBO-ish ontologies.
Koza
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38
Data transformation framework for LinkML data models
Gsso
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37
GSSO is the Gender, Sex, and Sex Orientation ontology, including terms related to gender identity and expression, sexual and romantic identity and orientation, and sexual and reproductive behavior.
Symptomontology
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34
The symptom ontology was designed around the guiding concept of a symptom being: “A perceived change in function, sensation or appearance reported by a patient indicative of a disease”. Understanding the close relationship of Signs and Symptoms, where Signs are the objective observation of an illness, the Symptom Ontology will work to broaden it’s scope to capture and document in a more robust manor these two sets of terms. Understanding that at times, the same term may be both a Sign and a Symp
Semantic Sql
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32
SQL and SQLite builds of OWL ontologies
Environmental Exposure Ontology
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30
Modular environmental exposures ontology
Shapes Of You
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28
💠 An index for linked open data & standard knowledge descriptions (ontologies, vocabularies, shapes, queries, mappings)
Ncbitaxon
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24
Build for NCBITaxon
Behavior Ontology
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23
Neuro Behaviour Ontology: an ontology for human and animal behaviour processes and behaviour phenotypes
Fastobo Py
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23
Faultless AST for Open Biomedical Ontologies in Python.
Cido
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20
CIDO: Coronavirus Infectious Disease Ontology
Fastobo
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20
Faultless AST for Open Biomedical Ontologies.
Curate Gpt
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20
LLM-driven curation assist tool (pre-alpha)
Mammalian Phenotype Ontology
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19
Standard terms for annotating mammalian phenotypic data
Hpo Translations
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19
Internationalisation of the HPO content
Mental Functioning Ontology
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19
Ontology for all aspects of human mental functioning
Drosophila Anatomy Developmental Ontology
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18
The home of the Drosophila anatomy ontology
Clo
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18
Communitiy-based Cell Line Ontology
Stato
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17
This is the development repository for the STATistics Ontology (STATO). For more information and demonstration on the ontology content, please visit its website:
Unit Ontology
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17
An ontology of units of measurements
Dosdp Tools
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15
Utility for working with DOSDP design patterns and OWL ontologies
Vo
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14
Vaccine Ontology
Foodbiomarkerontology
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12
🚀 Food-Biomarker Ontology defines the relationships between foods and their associated metabolites (biomarkers) through a formal ontology
Rsc Cmo
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12
Chemical Methods Ontology
Plant Stress Ontology
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12
An ontology containing biotic and abiotic plant stresses. Part of the Planteome suite of reference ontologies. Formerly called the Ontology of Plant Stress
Cdno
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11
Compositional Dietary Nutrition Ontology
C Elegans Phenotype Ontology
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10
Ontology for phenotypes pertaining to the nematode Caenorhabditis elegans and related nematodes used by the nematode genome database WormBase
Nomen
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10
A nomenclatural ontology for names (not concepts).
Semanticchemistry
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10
Chemical Information Ontology
Aism
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10
This repository contains the ontology for the Anatomy of the Insect SkeletoMuscular system (AISM), which contains terms used to describe the cuticle - as a single anatomical structure - and the skeletal muscle system, to be used in insect biodiversity research.
Cdao
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9
Comparative Data Analysis Ontology - A formalization of concepts and relations relevant to evolutionary comparative analysis
Zebrafish Phenotype Ontology
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9
A vocabulary for describing Zebrafish Phenotypes
Developmental Stage Ontologies
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9
Source files for various species-specific stage ontologies
Flybase Controlled Vocabulary
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9
The home of the FlyBase miscellaneous ontologies - incorporating the Drosophila Phenotype Ontology (see also FlyBase/drosophila-phenotype-ontology)
Xenopus Phenotype Ontology
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9
XPO represents anatomical, cellular, and gene function phenotypes occurring throughout the development of the African frogs Xenopus laevis and X. tropicalis.
Mro
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8
The MHC Restriction Ontology
C Elegans Gross Anatomy Ontology
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8
C. elegans Gross Anatomy Ontology
Ontology For Nutritional Studies
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8
The Ontology for Nutritional Studies (ONS) has been developed as part of the ENPADASI European project (http://www.enpadasi.eu/) with the aim to define a common language and building ontologies for nutritional studies.
Provisional_cell_ontology
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7
Draft cell type definitions from data - candidates for inclusion in CL
Fungal Anatomy Ontology
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7
A structured controlled vocabulary for the anatomy of fungi
Brain_data_standards_ontologies
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7
A repository for co-ordinating work on ontologies for the Brain Data Standards Project
Vertebrate Trait Ontology
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6
Terms for annotation of vertebrate trait data
Dicty Phenotype Ontology
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6
Dicty Phenotype Ontology
Colao
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5
The Coleoptera Anatomy Ontology contains terms used for describing the anatomy and phenotype of beetles in biodiversity research.
Covid19 Epidemiology Ontology
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5
Epidemiology and monitoring ontology for COVID-19
Phipo
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5
Pathogen-Host Interaction Phenotype Ontology
Xao
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5
XAO represents the anatomy and development of the African frogs Xenopus laevis and X. tropicalis.
Sparqlfun
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5
sparql templates for linkml (alpha)
Planaria Ontology
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5
PLANA, the PLANarian Anatomy Ontology, encompasses the anatomy of developmental stages and adult biotypes of Schmidtea mediterranea.
Opmi
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5
OPMI: Ontology of Precision Medicine and Investigation
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